Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
NR1H2P55055 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.55□□□□□ -0.08
NR1H2P55055 AC127383.1-201ENST00000444697 1800 ntBASIC14.55□□□□□ -0.08
NR1H2P55055 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.55□□□□□ -0.08
NR1H2P55055 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.55□□□□□ -0.08
NR1H2P55055 AC245100.5-201ENST00000452108 331 ntBASIC14.55□□□□□ -0.08
NR1H2P55055 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 AC069335.1-201ENST00000489972 472 ntBASIC14.55□□□□□ -0.08
NR1H2P55055 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.55□□□□□ -0.08
NR1H2P55055 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.55□□□□□ -0.08
NR1H2P55055 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.55□□□□□ -0.08
NR1H2P55055 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.55□□□□□ -0.08
NR1H2P55055 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.55□□□□□ -0.08
NR1H2P55055 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.55□□□□□ -0.08
NR1H2P55055 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.55□□□□□ -0.08
NR1H2P55055 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.55□□□□□ -0.08
NR1H2P55055 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NR1H2P55055 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NR1H2P55055 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NR1H2P55055 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.55□□□□□ -0.08
NR1H2P55055 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.54□□□□□ -0.08
NR1H2P55055 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.54□□□□□ -0.08
NR1H2P55055 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NR1H2P55055 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
NR1H2P55055 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NR1H2P55055 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.54□□□□□ -0.08
NR1H2P55055 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
NR1H2P55055 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.54□□□□□ -0.08
NR1H2P55055 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.54□□□□□ -0.08
NR1H2P55055 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.54□□□□□ -0.08
NR1H2P55055 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 AC092474.2-201ENST00000424288 719 ntBASIC14.54□□□□□ -0.08
NR1H2P55055 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.54□□□□□ -0.08
NR1H2P55055 AC109322.1-201ENST00000524499 1264 ntBASIC14.54□□□□□ -0.08
NR1H2P55055 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NR1H2P55055 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 AC243562.1-201ENST00000560672 389 ntBASIC14.54□□□□□ -0.08
NR1H2P55055 SPCS2P1-201ENST00000561636 679 ntBASIC14.54□□□□□ -0.08
NR1H2P55055 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.54□□□□□ -0.08
NR1H2P55055 AL031055.1-201ENST00000606362 631 ntBASIC14.54□□□□□ -0.08
NR1H2P55055 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.54□□□□□ -0.08
NR1H2P55055 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.54□□□□□ -0.08
NR1H2P55055 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.54□□□□□ -0.08
NR1H2P55055 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NR1H2P55055 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.54□□□□□ -0.08
NR1H2P55055 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.54□□□□□ -0.08
NR1H2P55055 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NR1H2P55055 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NR1H2P55055 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NR1H2P55055 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NR1H2P55055 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NR1H2P55055 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR1H2P55055 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H2P55055 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms