Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.47□□□□□ -0.25
CCR9P51686 RPL13P2-201ENST00000440687 659 ntBASIC13.47□□□□□ -0.25
CCR9P51686 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCR9P51686 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
CCR9P51686 KRT18P43-201ENST00000469825 1281 ntBASIC13.47□□□□□ -0.25
CCR9P51686 YBX1P5-201ENST00000509441 847 ntBASIC13.47□□□□□ -0.25
CCR9P51686 AP000344.2-201ENST00000512987 629 ntBASIC13.47□□□□□ -0.25
CCR9P51686 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.47□□□□□ -0.25
CCR9P51686 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.47□□□□□ -0.25
CCR9P51686 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.47□□□□□ -0.25
CCR9P51686 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.47□□□□□ -0.25
CCR9P51686 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.47□□□□□ -0.25
CCR9P51686 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.47□□□□□ -0.25
CCR9P51686 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CCR9P51686 AL033527.5-202ENST00000641632 1098 ntBASIC13.47□□□□□ -0.25
CCR9P51686 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCR9P51686 MTHFR-210ENST00000641407 2387 ntBASIC13.47□□□□□ -0.25
CCR9P51686 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.47□□□□□ -0.25
CCR9P51686 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.47□□□□□ -0.25
CCR9P51686 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCR9P51686 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.47□□□□□ -0.25
CCR9P51686 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCR9P51686 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCR9P51686 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CCR9P51686 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCR9P51686 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCR9P51686 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCR9P51686 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CCR9P51686 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCR9P51686 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCR9P51686 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCR9P51686 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CCR9P51686 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.46□□□□□ -0.25
CCR9P51686 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.46□□□□□ -0.25
CCR9P51686 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CCR9P51686 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.46□□□□□ -0.25
CCR9P51686 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.46□□□□□ -0.25
CCR9P51686 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.46□□□□□ -0.25
CCR9P51686 MIR574-201ENST00000385209 96 ntBASIC13.46□□□□□ -0.25
CCR9P51686 SPDYE7P-202ENST00000420373 878 ntBASIC13.46□□□□□ -0.25
CCR9P51686 KRT18P64-201ENST00000434946 1219 ntBASIC13.46□□□□□ -0.25
CCR9P51686 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.46□□□□□ -0.25
CCR9P51686 AL589739.1-201ENST00000607720 493 ntBASIC13.46□□□□□ -0.25
CCR9P51686 AC009093.7-201ENST00000623853 1223 ntBASIC13.46□□□□□ -0.25
CCR9P51686 LINC00628-201ENST00000628516 1289 ntBASIC13.46□□□□□ -0.25
CCR9P51686 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.46□□□□□ -0.25
CCR9P51686 AC107918.4-201ENST00000641966 3141 ntBASIC13.46□□□□□ -0.25
CCR9P51686 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.46□□□□□ -0.25
CCR9P51686 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 CETN4P-206ENST00000642099 2168 ntBASIC13.46□□□□□ -0.25
CCR9P51686 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CCR9P51686 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCR9P51686 AC138969.3-201ENST00000546612 1459 ntBASIC13.46□□□□□ -0.25
CCR9P51686 AC138932.2-201ENST00000548268 1459 ntBASIC13.46□□□□□ -0.25
CCR9P51686 AC126755.4-201ENST00000549796 1459 ntBASIC13.46□□□□□ -0.25
CCR9P51686 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.46□□□□□ -0.25
CCR9P51686 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CCR9P51686 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.25
CCR9P51686 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCR9P51686 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CCR9P51686 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCR9P51686 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCR9P51686 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CCR9P51686 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.46□□□□□ -0.26
CCR9P51686 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCR9P51686 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.46□□□□□ -0.26
CCR9P51686 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.46□□□□□ -0.26
CCR9P51686 AC092135.3-201ENST00000624151 1846 ntBASIC13.46□□□□□ -0.26
CCR9P51686 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCR9P51686 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCR9P51686 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCR9P51686 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCR9P51686 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCR9P51686 AC018529.2-202ENST00000611482 3087 ntBASIC13.45□□□□□ -0.26
CCR9P51686 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCR9P51686 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.45□□□□□ -0.26
CCR9P51686 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCR9P51686 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms