Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 FO538757.1-201ENST00000623083 1397 ntBASIC13.61□□□□□ -0.23
SRP9P49458 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.61□□□□□ -0.23
SRP9P49458 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.61□□□□□ -0.23
SRP9P49458 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.61□□□□□ -0.23
SRP9P49458 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SRP9P49458 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.61□□□□□ -0.23
SRP9P49458 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 HSPA7-201ENST00000445535 1927 ntBASIC13.61□□□□□ -0.23
SRP9P49458 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.61□□□□□ -0.23
SRP9P49458 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.61□□□□□ -0.23
SRP9P49458 AC027369.6-201ENST00000525520 931 ntBASIC13.61□□□□□ -0.23
SRP9P49458 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.61□□□□□ -0.23
SRP9P49458 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SRP9P49458 AL133215.2-201ENST00000609242 977 ntBASIC13.61□□□□□ -0.23
SRP9P49458 AC093512.1-201ENST00000617969 520 ntBASIC13.61□□□□□ -0.23
SRP9P49458 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 KRT8P37-201ENST00000451609 1420 ntBASIC13.61□□□□□ -0.23
SRP9P49458 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.61□□□□□ -0.23
SRP9P49458 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SRP9P49458 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SRP9P49458 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SRP9P49458 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SRP9P49458 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 KRT8P12-202ENST00000472924 1397 ntBASIC13.6□□□□□ -0.23
SRP9P49458 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SRP9P49458 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SRP9P49458 FO393414.2-201ENST00000405153 598 ntBASIC13.6□□□□□ -0.23
SRP9P49458 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SRP9P49458 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.6□□□□□ -0.23
SRP9P49458 SPDYE17-201ENST00000412399 783 ntBASIC13.6□□□□□ -0.23
SRP9P49458 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SRP9P49458 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.6□□□□□ -0.23
SRP9P49458 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
SRP9P49458 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.6□□□□□ -0.23
SRP9P49458 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRP9P49458 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.6□□□□□ -0.23
SRP9P49458 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SRP9P49458 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.59□□□□□ -0.23
SRP9P49458 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.59□□□□□ -0.23
SRP9P49458 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.59□□□□□ -0.23
SRP9P49458 BNIP3P1-202ENST00000550043 1585 ntBASIC13.59□□□□□ -0.23
SRP9P49458 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms