Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRA4P48169 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
GABRA4P48169 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRA4P48169 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.37□□□□□ -0.11
GABRA4P48169 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.37□□□□□ -0.11
GABRA4P48169 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.37□□□□□ -0.11
GABRA4P48169 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.37□□□□□ -0.11
GABRA4P48169 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABRA4P48169 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRA4P48169 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.37□□□□□ -0.11
GABRA4P48169 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRA4P48169 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GABRA4P48169 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.36□□□□□ -0.11
GABRA4P48169 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GABRA4P48169 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.36□□□□□ -0.11
GABRA4P48169 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GABRA4P48169 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.36□□□□□ -0.11
GABRA4P48169 AP000593.2-201ENST00000542775 1433 ntBASIC14.36□□□□□ -0.11
GABRA4P48169 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.36□□□□□ -0.11
GABRA4P48169 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.36□□□□□ -0.11
GABRA4P48169 CHMP1AP1-201ENST00000445563 662 ntBASIC14.36□□□□□ -0.11
GABRA4P48169 AC108725.1-201ENST00000495472 409 ntBASIC14.36□□□□□ -0.11
GABRA4P48169 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GABRA4P48169 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.36□□□□□ -0.11
GABRA4P48169 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 EEF1DP1-201ENST00000585891 896 ntBASIC14.36□□□□□ -0.11
GABRA4P48169 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.36□□□□□ -0.11
GABRA4P48169 MIR6869-201ENST00000619434 62 ntBASIC14.36□□□□□ -0.11
GABRA4P48169 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.36□□□□□ -0.11
GABRA4P48169 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.36□□□□□ -0.11
GABRA4P48169 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.36□□□□□ -0.11
GABRA4P48169 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.36□□□□□ -0.11
GABRA4P48169 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRA4P48169 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
GABRA4P48169 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.35□□□□□ -0.11
GABRA4P48169 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 AC073347.1-201ENST00000421633 2643 ntBASIC14.35□□□□□ -0.11
GABRA4P48169 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.35□□□□□ -0.11
GABRA4P48169 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.35□□□□□ -0.11
GABRA4P48169 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.35□□□□□ -0.11
GABRA4P48169 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.35□□□□□ -0.11
GABRA4P48169 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GABRA4P48169 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 MIR326-201ENST00000362220 95 ntBASIC14.35□□□□□ -0.11
GABRA4P48169 RN7SKP230-201ENST00000365642 335 ntBASIC14.35□□□□□ -0.11
GABRA4P48169 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 AC004945.1-201ENST00000416738 983 ntBASIC14.35□□□□□ -0.11
GABRA4P48169 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.35□□□□□ -0.11
GABRA4P48169 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.35□□□□□ -0.11
GABRA4P48169 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.35□□□□□ -0.11
GABRA4P48169 RPSAP36-202ENST00000494591 1261 ntBASIC14.35□□□□□ -0.11
GABRA4P48169 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
GABRA4P48169 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.35□□□□□ -0.11
GABRA4P48169 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.35□□□□□ -0.11
GABRA4P48169 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.35□□□□□ -0.11
GABRA4P48169 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.35□□□□□ -0.11
GABRA4P48169 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.35□□□□□ -0.11
GABRA4P48169 AC138696.2-201ENST00000607376 223 ntBASIC14.35□□□□□ -0.11
GABRA4P48169 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.35□□□□□ -0.11
GABRA4P48169 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRA4P48169 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms