Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.78□□□□□ -0.2
APOBEC1P41238 AC022616.1-201ENST00000518688 554 ntBASIC13.78□□□□□ -0.2
APOBEC1P41238 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.78□□□□□ -0.2
APOBEC1P41238 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.78□□□□□ -0.2
APOBEC1P41238 CLUHP6-201ENST00000580789 941 ntBASIC13.78□□□□□ -0.2
APOBEC1P41238 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.78□□□□□ -0.2
APOBEC1P41238 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
APOBEC1P41238 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 TNRC18P2-201ENST00000417666 2714 ntBASIC13.78□□□□□ -0.2
APOBEC1P41238 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.78□□□□□ -0.2
APOBEC1P41238 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.78□□□□□ -0.2
APOBEC1P41238 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.78□□□□□ -0.2
APOBEC1P41238 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBEC1P41238 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.2
APOBEC1P41238 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
APOBEC1P41238 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
APOBEC1P41238 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.77□□□□□ -0.2
APOBEC1P41238 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
APOBEC1P41238 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 RNU1-114P-201ENST00000365297 166 ntBASIC13.77□□□□□ -0.21
APOBEC1P41238 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.77□□□□□ -0.21
APOBEC1P41238 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.77□□□□□ -0.21
APOBEC1P41238 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
APOBEC1P41238 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.77□□□□□ -0.21
APOBEC1P41238 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.77□□□□□ -0.21
APOBEC1P41238 ACTG1P3-201ENST00000431775 1114 ntBASIC13.77□□□□□ -0.21
APOBEC1P41238 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.77□□□□□ -0.21
APOBEC1P41238 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 RN7SL752P-201ENST00000463779 287 ntBASIC13.77□□□□□ -0.21
APOBEC1P41238 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 AC022137.2-201ENST00000503482 481 ntBASIC13.77□□□□□ -0.21
APOBEC1P41238 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.77□□□□□ -0.21
APOBEC1P41238 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
APOBEC1P41238 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.77□□□□□ -0.21
APOBEC1P41238 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
APOBEC1P41238 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.77□□□□□ -0.21
APOBEC1P41238 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.77□□□□□ -0.21
APOBEC1P41238 AC013726.1-201ENST00000563747 2285 ntBASIC13.77□□□□□ -0.21
APOBEC1P41238 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
APOBEC1P41238 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.77□□□□□ -0.21
APOBEC1P41238 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.77□□□□□ -0.21
APOBEC1P41238 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
APOBEC1P41238 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.77□□□□□ -0.21
APOBEC1P41238 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOBEC1P41238 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
APOBEC1P41238 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
APOBEC1P41238 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOBEC1P41238 AJ011931.1-201ENST00000618749 2492 ntBASIC13.76□□□□□ -0.21
APOBEC1P41238 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOBEC1P41238 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
APOBEC1P41238 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOBEC1P41238 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.76□□□□□ -0.21
APOBEC1P41238 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOBEC1P41238 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.76□□□□□ -0.21
APOBEC1P41238 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.76□□□□□ -0.21
APOBEC1P41238 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
APOBEC1P41238 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.76□□□□□ -0.21
APOBEC1P41238 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOBEC1P41238 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOBEC1P41238 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.76□□□□□ -0.21
APOBEC1P41238 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOBEC1P41238 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOBEC1P41238 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.76□□□□□ -0.21
APOBEC1P41238 LRRC59-203ENST00000576448 1531 ntBASIC13.76□□□□□ -0.21
APOBEC1P41238 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.76□□□□□ -0.21
APOBEC1P41238 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOBEC1P41238 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.76□□□□□ -0.21
APOBEC1P41238 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOBEC1P41238 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOBEC1P41238 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.76□□□□□ -0.21
APOBEC1P41238 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOBEC1P41238 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOBEC1P41238 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
APOBEC1P41238 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms