Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.33■□□□□ 0.04
MDH1P40925 AC105339.3-201ENST00000560043 636 ntBASIC15.33■□□□□ 0.04
MDH1P40925 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.33■□□□□ 0.04
MDH1P40925 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.33■□□□□ 0.04
MDH1P40925 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.33■□□□□ 0.04
MDH1P40925 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.33■□□□□ 0.04
MDH1P40925 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.33■□□□□ 0.04
MDH1P40925 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.33■□□□□ 0.04
MDH1P40925 CLEC4GP1-201ENST00000596555 870 ntBASIC15.33■□□□□ 0.04
MDH1P40925 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
MDH1P40925 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
MDH1P40925 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
MDH1P40925 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
MDH1P40925 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 CICP16-201ENST00000502609 2813 ntBASIC15.33■□□□□ 0.04
MDH1P40925 AC118758.2-201ENST00000614242 2813 ntBASIC15.33■□□□□ 0.04
MDH1P40925 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 AP002414.3-201ENST00000589352 1468 ntBASIC15.33■□□□□ 0.04
MDH1P40925 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
MDH1P40925 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MDH1P40925 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
MDH1P40925 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.32■□□□□ 0.04
MDH1P40925 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.32■□□□□ 0.04
MDH1P40925 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.32■□□□□ 0.04
MDH1P40925 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MDH1P40925 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.32■□□□□ 0.04
MDH1P40925 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MDH1P40925 AL139385.1-201ENST00000611744 3272 ntBASIC15.32■□□□□ 0.04
MDH1P40925 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC15.32■□□□□ 0.04
MDH1P40925 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MDH1P40925 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.32■□□□□ 0.04
MDH1P40925 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MDH1P40925 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
MDH1P40925 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.32■□□□□ 0.04
MDH1P40925 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
MDH1P40925 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MDH1P40925 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MDH1P40925 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MDH1P40925 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MDH1P40925 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MDH1P40925 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.32■□□□□ 0.04
MDH1P40925 ATP5G2P1-201ENST00000433580 426 ntBASIC15.32■□□□□ 0.04
MDH1P40925 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.32■□□□□ 0.04
MDH1P40925 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.32■□□□□ 0.04
MDH1P40925 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.32■□□□□ 0.04
MDH1P40925 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
MDH1P40925 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.32■□□□□ 0.04
MDH1P40925 REXO1L6P-202ENST00000619970 1078 ntBASIC15.32■□□□□ 0.04
MDH1P40925 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.32■□□□□ 0.04
MDH1P40925 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MDH1P40925 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.32■□□□□ 0.04
MDH1P40925 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.32■□□□□ 0.04
MDH1P40925 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MDH1P40925 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.32■□□□□ 0.04
MDH1P40925 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.32■□□□□ 0.04
MDH1P40925 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MDH1P40925 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MDH1P40925 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MDH1P40925 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MDH1P40925 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC15.32■□□□□ 0.04
MDH1P40925 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
MDH1P40925 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.31■□□□□ 0.04
MDH1P40925 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 C2-206ENST00000442278 2434 ntTSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 BEND3P3-201ENST00000611030 2440 ntBASIC15.31■□□□□ 0.04
MDH1P40925 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.31■□□□□ 0.04
MDH1P40925 AC105233.2-201ENST00000523697 349 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms