Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.7■□□□□ 0.26
USP8P40818 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
USP8P40818 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
USP8P40818 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
USP8P40818 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.7■□□□□ 0.26
USP8P40818 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
USP8P40818 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
USP8P40818 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
USP8P40818 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
USP8P40818 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.7■□□□□ 0.26
USP8P40818 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.7■□□□□ 0.26
USP8P40818 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 TSSK5P-201ENST00000423978 907 ntBASIC16.7■□□□□ 0.26
USP8P40818 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.7■□□□□ 0.26
USP8P40818 AC092183.1-201ENST00000469884 875 ntBASIC16.7■□□□□ 0.26
USP8P40818 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.7■□□□□ 0.26
USP8P40818 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.7■□□□□ 0.26
USP8P40818 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.7■□□□□ 0.26
USP8P40818 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.7■□□□□ 0.26
USP8P40818 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.7■□□□□ 0.26
USP8P40818 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.7■□□□□ 0.26
USP8P40818 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
USP8P40818 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
USP8P40818 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.7■□□□□ 0.26
USP8P40818 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
USP8P40818 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 AL121723.1-201ENST00000445194 1519 ntBASIC16.7■□□□□ 0.26
USP8P40818 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
USP8P40818 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
USP8P40818 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.7■□□□□ 0.26
USP8P40818 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
USP8P40818 AGAP7P-201ENST00000582299 2062 ntBASIC16.69■□□□□ 0.26
USP8P40818 AGAP14-201ENST00000624701 2060 ntBASIC16.69■□□□□ 0.26
USP8P40818 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 AC106881.1-201ENST00000605849 3329 ntBASIC16.69■□□□□ 0.26
USP8P40818 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
USP8P40818 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
USP8P40818 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.69■□□□□ 0.26
USP8P40818 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
USP8P40818 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.69■□□□□ 0.26
USP8P40818 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.69■□□□□ 0.26
USP8P40818 FAM8A3P-201ENST00000427218 844 ntBASIC16.69■□□□□ 0.26
USP8P40818 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 AC093214.1-201ENST00000511688 1107 ntBASIC16.69■□□□□ 0.26
USP8P40818 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.69■□□□□ 0.26
USP8P40818 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.69■□□□□ 0.26
USP8P40818 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
USP8P40818 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.69■□□□□ 0.26
USP8P40818 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
USP8P40818 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
USP8P40818 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.69■□□□□ 0.26
USP8P40818 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.69■□□□□ 0.26
USP8P40818 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.69■□□□□ 0.26
USP8P40818 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.69■□□□□ 0.26
USP8P40818 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
USP8P40818 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.69■□□□□ 0.26
USP8P40818 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms