Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
GABRA3P34903 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.2□□□□□ -0.14
GABRA3P34903 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 AL158070.2-201ENST00000623713 1621 ntBASIC14.2□□□□□ -0.14
GABRA3P34903 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.2□□□□□ -0.14
GABRA3P34903 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.2□□□□□ -0.14
GABRA3P34903 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.2□□□□□ -0.14
GABRA3P34903 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
GABRA3P34903 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.2□□□□□ -0.14
GABRA3P34903 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.2□□□□□ -0.14
GABRA3P34903 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.2□□□□□ -0.14
GABRA3P34903 HMGN1P19-201ENST00000436976 333 ntBASIC14.2□□□□□ -0.14
GABRA3P34903 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.2□□□□□ -0.14
GABRA3P34903 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.2□□□□□ -0.14
GABRA3P34903 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.2□□□□□ -0.14
GABRA3P34903 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.2□□□□□ -0.14
GABRA3P34903 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.2□□□□□ -0.14
GABRA3P34903 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
GABRA3P34903 AC133539.2-201ENST00000604757 467 ntBASIC14.2□□□□□ -0.14
GABRA3P34903 AC008494.3-201ENST00000606615 944 ntBASIC14.2□□□□□ -0.14
GABRA3P34903 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.2□□□□□ -0.14
GABRA3P34903 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.2□□□□□ -0.14
GABRA3P34903 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GABRA3P34903 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.2□□□□□ -0.14
GABRA3P34903 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.2□□□□□ -0.14
GABRA3P34903 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 AL157414.3-201ENST00000624276 1954 ntBASIC14.2□□□□□ -0.14
GABRA3P34903 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GABRA3P34903 CICP24-201ENST00000605464 2705 ntBASIC14.2□□□□□ -0.14
GABRA3P34903 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABRA3P34903 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.19□□□□□ -0.14
GABRA3P34903 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
GABRA3P34903 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
GABRA3P34903 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.19□□□□□ -0.14
GABRA3P34903 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.19□□□□□ -0.14
GABRA3P34903 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GABRA3P34903 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GABRA3P34903 AC013726.1-201ENST00000563747 2285 ntBASIC14.19□□□□□ -0.14
GABRA3P34903 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
GABRA3P34903 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.19□□□□□ -0.14
GABRA3P34903 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.19□□□□□ -0.14
GABRA3P34903 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.19□□□□□ -0.14
GABRA3P34903 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.19□□□□□ -0.14
GABRA3P34903 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.19□□□□□ -0.14
GABRA3P34903 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 AC190387.1-201ENST00000551683 408 ntBASIC14.19□□□□□ -0.14
GABRA3P34903 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GABRA3P34903 AC092364.2-202ENST00000597012 1073 ntBASIC14.19□□□□□ -0.14
GABRA3P34903 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.19□□□□□ -0.14
GABRA3P34903 BX539320.1-201ENST00000623759 877 ntBASIC14.19□□□□□ -0.14
GABRA3P34903 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GABRA3P34903 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.19□□□□□ -0.14
GABRA3P34903 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
GABRA3P34903 REXO1L5P-201ENST00000622260 2098 ntBASIC14.19□□□□□ -0.14
GABRA3P34903 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
GABRA3P34903 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.19□□□□□ -0.14
GABRA3P34903 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA3P34903 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
GABRA3P34903 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
GABRA3P34903 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.19□□□□□ -0.14
GABRA3P34903 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms