Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.02□□□□□ -0.17
SHC1P29353 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.02□□□□□ -0.17
SHC1P29353 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
SHC1P29353 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SHC1P29353 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SHC1P29353 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.02□□□□□ -0.17
SHC1P29353 AC093726.1-201ENST00000608064 963 ntBASIC14.02□□□□□ -0.17
SHC1P29353 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SHC1P29353 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHC1P29353 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
SHC1P29353 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SHC1P29353 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
SHC1P29353 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHC1P29353 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHC1P29353 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHC1P29353 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SHC1P29353 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SHC1P29353 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SHC1P29353 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.02□□□□□ -0.17
SHC1P29353 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SHC1P29353 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 OR2I1P-209ENST00000641730 5365 ntBASIC14.01□□□□□ -0.17
SHC1P29353 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SHC1P29353 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.01□□□□□ -0.17
SHC1P29353 AJ011931.1-201ENST00000618749 2492 ntBASIC14.01□□□□□ -0.17
SHC1P29353 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SHC1P29353 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.01□□□□□ -0.17
SHC1P29353 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 MYCLP2-201ENST00000449268 967 ntBASIC14.01□□□□□ -0.17
SHC1P29353 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.01□□□□□ -0.17
SHC1P29353 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.01□□□□□ -0.17
SHC1P29353 ELK1P1-201ENST00000485699 580 ntBASIC14.01□□□□□ -0.17
SHC1P29353 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.01□□□□□ -0.17
SHC1P29353 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.01□□□□□ -0.17
SHC1P29353 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.01□□□□□ -0.17
SHC1P29353 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.01□□□□□ -0.17
SHC1P29353 TP53TG3HP-202ENST00000569755 579 ntBASIC14.01□□□□□ -0.17
SHC1P29353 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.01□□□□□ -0.17
SHC1P29353 AC140912.1-201ENST00000577171 1054 ntBASIC14.01□□□□□ -0.17
SHC1P29353 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.01□□□□□ -0.17
SHC1P29353 CTBP2P3-201ENST00000585629 1255 ntBASIC14.01□□□□□ -0.17
SHC1P29353 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.01□□□□□ -0.17
SHC1P29353 AC025181.2-201ENST00000606994 802 ntBASIC14.01□□□□□ -0.17
SHC1P29353 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SHC1P29353 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.01□□□□□ -0.17
SHC1P29353 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SHC1P29353 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.01□□□□□ -0.17
SHC1P29353 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHC1P29353 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.01□□□□□ -0.17
SHC1P29353 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14□□□□□ -0.17
SHC1P29353 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
SHC1P29353 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SHC1P29353 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SHC1P29353 AL391825.1-201ENST00000457671 1364 ntBASIC14□□□□□ -0.17
SHC1P29353 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
SHC1P29353 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14□□□□□ -0.17
SHC1P29353 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14□□□□□ -0.17
SHC1P29353 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14□□□□□ -0.17
SHC1P29353 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SHC1P29353 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14□□□□□ -0.17
SHC1P29353 DGCR5-201ENST00000399539 862 ntBASIC14□□□□□ -0.17
SHC1P29353 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14□□□□□ -0.17
SHC1P29353 AC087499.6-201ENST00000411576 835 ntBASIC14□□□□□ -0.17
SHC1P29353 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14□□□□□ -0.17
SHC1P29353 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHC1P29353 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms