Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 MIR4313-201ENST00000580760 101 ntBASIC13.85□□□□□ -0.19
APEX1P27695 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APEX1P27695 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.85□□□□□ -0.19
APEX1P27695 AL158211.3-201ENST00000607385 239 ntBASIC13.85□□□□□ -0.19
APEX1P27695 TEX28P1-201ENST00000613479 1221 ntBASIC13.85□□□□□ -0.19
APEX1P27695 TEX28P2-201ENST00000617764 1221 ntBASIC13.85□□□□□ -0.19
APEX1P27695 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APEX1P27695 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
APEX1P27695 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
APEX1P27695 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
APEX1P27695 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
APEX1P27695 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APEX1P27695 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
APEX1P27695 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APEX1P27695 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APEX1P27695 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APEX1P27695 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APEX1P27695 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APEX1P27695 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.85□□□□□ -0.19
APEX1P27695 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
APEX1P27695 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.85□□□□□ -0.19
APEX1P27695 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APEX1P27695 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APEX1P27695 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.85□□□□□ -0.19
APEX1P27695 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.85□□□□□ -0.19
APEX1P27695 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.85□□□□□ -0.19
APEX1P27695 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.85□□□□□ -0.19
APEX1P27695 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
APEX1P27695 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.85□□□□□ -0.19
APEX1P27695 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
APEX1P27695 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.85□□□□□ -0.19
APEX1P27695 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
APEX1P27695 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.84□□□□□ -0.19
APEX1P27695 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.84□□□□□ -0.19
APEX1P27695 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.84□□□□□ -0.19
APEX1P27695 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.84□□□□□ -0.19
APEX1P27695 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
APEX1P27695 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
APEX1P27695 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.84□□□□□ -0.19
APEX1P27695 HIST3H2BA-201ENST00000436555 524 ntBASIC13.84□□□□□ -0.19
APEX1P27695 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 SERBP1P3-201ENST00000459980 809 ntBASIC13.84□□□□□ -0.19
APEX1P27695 TERF1P3-201ENST00000505638 1227 ntBASIC13.84□□□□□ -0.19
APEX1P27695 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.84□□□□□ -0.19
APEX1P27695 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.84□□□□□ -0.19
APEX1P27695 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.84□□□□□ -0.19
APEX1P27695 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
APEX1P27695 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.84□□□□□ -0.19
APEX1P27695 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.84□□□□□ -0.19
APEX1P27695 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.84□□□□□ -0.19
APEX1P27695 MIR6069-201ENST00000620069 79 ntBASIC13.84□□□□□ -0.19
APEX1P27695 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.84□□□□□ -0.19
APEX1P27695 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
APEX1P27695 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.84□□□□□ -0.19
APEX1P27695 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
APEX1P27695 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
APEX1P27695 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
APEX1P27695 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
APEX1P27695 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.84□□□□□ -0.19
APEX1P27695 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
APEX1P27695 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 HSPA7-201ENST00000445535 1927 ntBASIC13.84□□□□□ -0.19
APEX1P27695 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.84□□□□□ -0.19
APEX1P27695 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
APEX1P27695 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APEX1P27695 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.84□□□□□ -0.19
APEX1P27695 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
APEX1P27695 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.83□□□□□ -0.19
APEX1P27695 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
APEX1P27695 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms