Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.32■□□□□ 0.52
CHMLP26374 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
CHMLP26374 PIN1P1-201ENST00000412108 996 ntBASIC18.32■□□□□ 0.52
CHMLP26374 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMLP26374 AC114812.1-204ENST00000449669 728 ntBASIC18.32■□□□□ 0.52
CHMLP26374 AC026434.2-201ENST00000506094 1078 ntBASIC18.32■□□□□ 0.52
CHMLP26374 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.32■□□□□ 0.52
CHMLP26374 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMLP26374 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.32■□□□□ 0.52
CHMLP26374 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.32■□□□□ 0.52
CHMLP26374 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMLP26374 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.32■□□□□ 0.52
CHMLP26374 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
CHMLP26374 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMLP26374 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMLP26374 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CHMLP26374 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CHMLP26374 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHMLP26374 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMLP26374 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHMLP26374 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMLP26374 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
CHMLP26374 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.31■□□□□ 0.52
CHMLP26374 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMLP26374 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHMLP26374 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMLP26374 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMLP26374 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CHMLP26374 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHMLP26374 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMLP26374 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMLP26374 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMLP26374 AC005089.1-201ENST00000619486 2241 ntBASIC18.31■□□□□ 0.52
CHMLP26374 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHMLP26374 AC139749.1-202ENST00000617529 3139 ntBASIC18.31■□□□□ 0.52
CHMLP26374 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMLP26374 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHMLP26374 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMLP26374 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMLP26374 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMLP26374 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMLP26374 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMLP26374 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMLP26374 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMLP26374 NORAD-201ENST00000565493 5339 ntBASIC18.3■□□□□ 0.52
CHMLP26374 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 AC022616.1-201ENST00000518688 554 ntBASIC18.3■□□□□ 0.52
CHMLP26374 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMLP26374 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.3■□□□□ 0.52
CHMLP26374 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.3■□□□□ 0.52
CHMLP26374 ENPP7P5-201ENST00000541031 1031 ntBASIC18.3■□□□□ 0.52
CHMLP26374 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.3■□□□□ 0.52
CHMLP26374 TP53TG3HP-202ENST00000569755 579 ntBASIC18.3■□□□□ 0.52
CHMLP26374 AC140912.1-201ENST00000577171 1054 ntBASIC18.3■□□□□ 0.52
CHMLP26374 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.3■□□□□ 0.52
CHMLP26374 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHMLP26374 AP005019.2-201ENST00000615104 511 ntBASIC18.3■□□□□ 0.52
CHMLP26374 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.3■□□□□ 0.52
CHMLP26374 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMLP26374 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMLP26374 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMLP26374 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.3■□□□□ 0.52
CHMLP26374 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMLP26374 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMLP26374 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHMLP26374 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHMLP26374 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms