Protein–RNA interactions for Protein: P21579

SYT1, Synaptotagmin-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1P21579 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.7■□□□□ 0.42
SYT1P21579 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.7■□□□□ 0.42
SYT1P21579 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 AL137783.1-201ENST00000623494 1896 ntBASIC17.7■□□□□ 0.42
SYT1P21579 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.7■□□□□ 0.42
SYT1P21579 KRT18P13-201ENST00000400056 1290 ntBASIC17.7■□□□□ 0.42
SYT1P21579 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.7■□□□□ 0.42
SYT1P21579 TSSK5P-201ENST00000423978 907 ntBASIC17.7■□□□□ 0.42
SYT1P21579 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.7■□□□□ 0.42
SYT1P21579 AL589987.1-201ENST00000453380 819 ntBASIC17.7■□□□□ 0.42
SYT1P21579 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.7■□□□□ 0.42
SYT1P21579 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.7■□□□□ 0.42
SYT1P21579 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.7■□□□□ 0.42
SYT1P21579 AC004449.1-201ENST00000564240 433 ntBASIC17.7■□□□□ 0.42
SYT1P21579 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.7■□□□□ 0.42
SYT1P21579 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.7■□□□□ 0.42
SYT1P21579 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.7■□□□□ 0.42
SYT1P21579 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.7■□□□□ 0.42
SYT1P21579 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
SYT1P21579 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.7■□□□□ 0.42
SYT1P21579 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.7■□□□□ 0.42
SYT1P21579 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.7■□□□□ 0.42
SYT1P21579 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 AC093525.8-201ENST00000624099 1342 ntBASIC17.7■□□□□ 0.42
SYT1P21579 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.7■□□□□ 0.42
SYT1P21579 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYT1P21579 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SYT1P21579 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SYT1P21579 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.69■□□□□ 0.42
SYT1P21579 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.69■□□□□ 0.42
SYT1P21579 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 TREML5P-201ENST00000421694 576 ntBASIC17.69■□□□□ 0.42
SYT1P21579 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.69■□□□□ 0.42
SYT1P21579 AC009477.1-201ENST00000452936 217 ntBASIC17.69■□□□□ 0.42
SYT1P21579 MEIS3P1-201ENST00000495167 958 ntBASIC17.69■□□□□ 0.42
SYT1P21579 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.69■□□□□ 0.42
SYT1P21579 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
SYT1P21579 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.69■□□□□ 0.42
SYT1P21579 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.69■□□□□ 0.42
SYT1P21579 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
SYT1P21579 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.69■□□□□ 0.42
SYT1P21579 AC009407.1-201ENST00000568958 598 ntBASIC17.69■□□□□ 0.42
SYT1P21579 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.69■□□□□ 0.42
SYT1P21579 AL158211.3-201ENST00000607385 239 ntBASIC17.69■□□□□ 0.42
SYT1P21579 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SYT1P21579 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.69■□□□□ 0.42
SYT1P21579 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYT1P21579 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.69■□□□□ 0.42
SYT1P21579 AC152010.1-201ENST00000415779 2006 ntBASIC17.69■□□□□ 0.42
SYT1P21579 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.69■□□□□ 0.42
SYT1P21579 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SYT1P21579 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SYT1P21579 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SYT1P21579 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYT1P21579 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYT1P21579 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYT1P21579 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYT1P21579 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYT1P21579 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.68■□□□□ 0.42
SYT1P21579 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.68■□□□□ 0.42
SYT1P21579 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SYT1P21579 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYT1P21579 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYT1P21579 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
SYT1P21579 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYT1P21579 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYT1P21579 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms