Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP4AP20648 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP4AP20648 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ATP4AP20648 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP4AP20648 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.83■□□□□ 0.29
ATP4AP20648 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP4AP20648 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP4AP20648 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP4AP20648 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP4AP20648 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP4AP20648 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATP4AP20648 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ATP4AP20648 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP4AP20648 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATP4AP20648 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP4AP20648 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP4AP20648 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP4AP20648 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP4AP20648 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ATP4AP20648 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP4AP20648 LILRP1-201ENST00000444199 1370 ntBASIC16.83■□□□□ 0.28
ATP4AP20648 AL591846.1-201ENST00000451736 433 ntBASIC16.83■□□□□ 0.28
ATP4AP20648 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP4AP20648 AL023775.1-201ENST00000454907 1746 ntBASIC16.83■□□□□ 0.28
ATP4AP20648 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP4AP20648 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP4AP20648 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP4AP20648 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP4AP20648 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ATP4AP20648 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ATP4AP20648 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP4AP20648 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP4AP20648 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
ATP4AP20648 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP4AP20648 RN7SL713P-201ENST00000582127 302 ntBASIC16.83■□□□□ 0.28
ATP4AP20648 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP4AP20648 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP4AP20648 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP4AP20648 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP4AP20648 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP4AP20648 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP4AP20648 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP4AP20648 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP4AP20648 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP4AP20648 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP4AP20648 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ATP4AP20648 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATP4AP20648 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP4AP20648 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP4AP20648 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ATP4AP20648 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP4AP20648 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP4AP20648 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATP4AP20648 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP4AP20648 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP4AP20648 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ATP4AP20648 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.82■□□□□ 0.28
ATP4AP20648 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.82■□□□□ 0.28
ATP4AP20648 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP4AP20648 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP4AP20648 AC091271.1-201ENST00000611877 1162 ntBASIC16.82■□□□□ 0.28
ATP4AP20648 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP4AP20648 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.82■□□□□ 0.28
ATP4AP20648 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP4AP20648 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP4AP20648 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP4AP20648 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP4AP20648 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.82■□□□□ 0.28
ATP4AP20648 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATP4AP20648 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP4AP20648 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATP4AP20648 AC138035.3-201ENST00000622706 2791 ntBASIC16.82■□□□□ 0.28
ATP4AP20648 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP4AP20648 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP4AP20648 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP4AP20648 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP4AP20648 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ATP4AP20648 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP4AP20648 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP4AP20648 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ATP4AP20648 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP4AP20648 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ATP4AP20648 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP4AP20648 AC013268.4-201ENST00000637413 2228 ntBASIC16.81■□□□□ 0.28
ATP4AP20648 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms