Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CHRM3P20309 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CHRM3P20309 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRM3P20309 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRM3P20309 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRM3P20309 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRM3P20309 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRM3P20309 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.22■□□□□ 0.03
CHRM3P20309 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CHRM3P20309 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRM3P20309 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRM3P20309 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.22■□□□□ 0.03
CHRM3P20309 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.22■□□□□ 0.03
CHRM3P20309 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRM3P20309 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
CHRM3P20309 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.22■□□□□ 0.03
CHRM3P20309 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRM3P20309 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.22■□□□□ 0.03
CHRM3P20309 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRM3P20309 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
CHRM3P20309 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CHRM3P20309 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRM3P20309 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHRM3P20309 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRM3P20309 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHRM3P20309 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CHRM3P20309 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHRM3P20309 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRM3P20309 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CHRM3P20309 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.21■□□□□ 0.03
CHRM3P20309 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CHRM3P20309 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.21■□□□□ 0.03
CHRM3P20309 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.21■□□□□ 0.03
CHRM3P20309 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.21■□□□□ 0.03
CHRM3P20309 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRM3P20309 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CHRM3P20309 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.21■□□□□ 0.03
CHRM3P20309 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.21■□□□□ 0.03
CHRM3P20309 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CHRM3P20309 AC004066.1-201ENST00000502488 802 ntBASIC15.21■□□□□ 0.03
CHRM3P20309 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.21■□□□□ 0.03
CHRM3P20309 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CHRM3P20309 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.21■□□□□ 0.03
CHRM3P20309 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.21■□□□□ 0.03
CHRM3P20309 AJ011932.1-201ENST00000621707 465 ntBASIC15.21■□□□□ 0.03
CHRM3P20309 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRM3P20309 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.21■□□□□ 0.03
CHRM3P20309 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHRM3P20309 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.21■□□□□ 0.03
CHRM3P20309 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CHRM3P20309 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CHRM3P20309 REXO1L4P-201ENST00000605109 1937 ntBASIC15.21■□□□□ 0.02
CHRM3P20309 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHRM3P20309 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CHRM3P20309 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHRM3P20309 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CHRM3P20309 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRM3P20309 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHRM3P20309 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRM3P20309 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHRM3P20309 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.2■□□□□ 0.02
CHRM3P20309 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRM3P20309 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRM3P20309 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRM3P20309 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CHRM3P20309 REXO1L2P-201ENST00000425429 2069 ntBASIC15.2■□□□□ 0.02
CHRM3P20309 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRM3P20309 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRM3P20309 LINC00552-201ENST00000625151 2579 ntBASIC15.2■□□□□ 0.02
CHRM3P20309 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHRM3P20309 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms