Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
ATF1P18846 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.43□□□□□ -0.26
ATF1P18846 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.43□□□□□ -0.26
ATF1P18846 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.43□□□□□ -0.26
ATF1P18846 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.43□□□□□ -0.26
ATF1P18846 MIR3687-2-201ENST00000577708 61 ntBASIC13.43□□□□□ -0.26
ATF1P18846 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.43□□□□□ -0.26
ATF1P18846 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.43□□□□□ -0.26
ATF1P18846 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 MIR3687-1-201ENST00000614492 61 ntBASIC13.43□□□□□ -0.26
ATF1P18846 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.43□□□□□ -0.26
ATF1P18846 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
ATF1P18846 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.43□□□□□ -0.26
ATF1P18846 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
ATF1P18846 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ATF1P18846 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.43□□□□□ -0.26
ATF1P18846 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.43□□□□□ -0.26
ATF1P18846 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATF1P18846 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.42□□□□□ -0.26
ATF1P18846 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.42□□□□□ -0.26
ATF1P18846 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ATF1P18846 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 AL359881.3-201ENST00000602640 1721 ntBASIC13.42□□□□□ -0.26
ATF1P18846 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.42□□□□□ -0.26
ATF1P18846 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
ATF1P18846 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ATF1P18846 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.42□□□□□ -0.26
ATF1P18846 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
ATF1P18846 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ATF1P18846 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ATF1P18846 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.42□□□□□ -0.26
ATF1P18846 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.42□□□□□ -0.26
ATF1P18846 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.42□□□□□ -0.26
ATF1P18846 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.42□□□□□ -0.26
ATF1P18846 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.42□□□□□ -0.26
ATF1P18846 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.42□□□□□ -0.26
ATF1P18846 AL079307.3-201ENST00000556114 283 ntBASIC13.42□□□□□ -0.26
ATF1P18846 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.42□□□□□ -0.26
ATF1P18846 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
ATF1P18846 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.42□□□□□ -0.26
ATF1P18846 MIR4453-201ENST00000584019 89 ntBASIC13.42□□□□□ -0.26
ATF1P18846 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.42□□□□□ -0.26
ATF1P18846 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.42□□□□□ -0.26
ATF1P18846 MIR6080-201ENST00000617359 66 ntBASIC13.42□□□□□ -0.26
ATF1P18846 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ATF1P18846 AC009093.7-201ENST00000623853 1223 ntBASIC13.42□□□□□ -0.26
ATF1P18846 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.42□□□□□ -0.26
ATF1P18846 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.42□□□□□ -0.26
ATF1P18846 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.42□□□□□ -0.26
ATF1P18846 AC011474.4-201ENST00000623523 2076 ntBASIC13.42□□□□□ -0.26
ATF1P18846 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.42□□□□□ -0.26
ATF1P18846 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.42□□□□□ -0.26
ATF1P18846 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.42□□□□□ -0.26
ATF1P18846 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.42□□□□□ -0.26
ATF1P18846 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.42□□□□□ -0.26
ATF1P18846 PTENP1-202ENST00000532280 3996 ntBASIC13.42□□□□□ -0.26
ATF1P18846 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ATF1P18846 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ATF1P18846 AC138969.3-201ENST00000546612 1459 ntBASIC13.42□□□□□ -0.26
ATF1P18846 AC138932.2-201ENST00000548268 1459 ntBASIC13.42□□□□□ -0.26
ATF1P18846 AC126755.4-201ENST00000549796 1459 ntBASIC13.42□□□□□ -0.26
ATF1P18846 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.42□□□□□ -0.26
ATF1P18846 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATF1P18846 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.41□□□□□ -0.26
ATF1P18846 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATF1P18846 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.41□□□□□ -0.26
ATF1P18846 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms