Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CCL2P13500 AC098614.1-201ENST00000368528 745 ntBASIC13.31□□□□□ -0.28
CCL2P13500 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CCL2P13500 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL2P13500 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCL2P13500 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCL2P13500 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CCL2P13500 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCL2P13500 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CCL2P13500 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL2P13500 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL2P13500 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL2P13500 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL2P13500 AC132938.2-201ENST00000579188 680 ntBASIC13.31□□□□□ -0.28
CCL2P13500 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL2P13500 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL2P13500 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CCL2P13500 BX539320.1-201ENST00000623759 877 ntBASIC13.31□□□□□ -0.28
CCL2P13500 AC005252.2-201ENST00000624630 1141 ntBASIC13.31□□□□□ -0.28
CCL2P13500 AL591163.1-201ENST00000641757 987 ntBASIC13.31□□□□□ -0.28
CCL2P13500 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CCL2P13500 MROH4P-201ENST00000431302 1578 ntBASIC13.31□□□□□ -0.28
CCL2P13500 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCL2P13500 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL2P13500 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CCL2P13500 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CCL2P13500 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL2P13500 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CCL2P13500 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCL2P13500 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
CCL2P13500 MSTO2P-201ENST00000314835 1709 ntBASIC13.3□□□□□ -0.28
CCL2P13500 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL2P13500 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CCL2P13500 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL2P13500 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL2P13500 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL2P13500 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL2P13500 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 AL162726.2-201ENST00000438986 1017 ntBASIC13.3□□□□□ -0.28
CCL2P13500 RN7SL837P-201ENST00000463010 287 ntBASIC13.3□□□□□ -0.28
CCL2P13500 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.3□□□□□ -0.28
CCL2P13500 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL2P13500 CLUHP6-201ENST00000580789 941 ntBASIC13.3□□□□□ -0.28
CCL2P13500 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL2P13500 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL2P13500 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.3□□□□□ -0.28
CCL2P13500 AL645728.2-202ENST00000641679 227 ntBASIC13.3□□□□□ -0.28
CCL2P13500 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms