Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
HOXC6P09630 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HOXC6P09630 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.01■□□□□ 0.31
HOXC6P09630 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.01■□□□□ 0.31
HOXC6P09630 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.01■□□□□ 0.31
HOXC6P09630 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXC6P09630 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXC6P09630 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.01■□□□□ 0.31
HOXC6P09630 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.01■□□□□ 0.31
HOXC6P09630 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HOXC6P09630 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 AC012044.1-201ENST00000603431 297 ntBASIC17.01■□□□□ 0.31
HOXC6P09630 AP003419.4-201ENST00000616071 517 ntBASIC17.01■□□□□ 0.31
HOXC6P09630 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.01■□□□□ 0.31
HOXC6P09630 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.01■□□□□ 0.31
HOXC6P09630 AC092127.1-201ENST00000567093 3455 ntBASIC17.01■□□□□ 0.31
HOXC6P09630 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXC6P09630 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HOXC6P09630 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.01■□□□□ 0.31
HOXC6P09630 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXC6P09630 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXC6P09630 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC6P09630 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17■□□□□ 0.31
HOXC6P09630 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17■□□□□ 0.31
HOXC6P09630 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17■□□□□ 0.31
HOXC6P09630 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
HOXC6P09630 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17■□□□□ 0.31
HOXC6P09630 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17■□□□□ 0.31
HOXC6P09630 KLF2P1-201ENST00000447438 1042 ntBASIC17■□□□□ 0.31
HOXC6P09630 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17■□□□□ 0.31
HOXC6P09630 AC090857.1-201ENST00000527400 390 ntBASIC17■□□□□ 0.31
HOXC6P09630 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
HOXC6P09630 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HOXC6P09630 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17■□□□□ 0.31
HOXC6P09630 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17■□□□□ 0.31
HOXC6P09630 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HOXC6P09630 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17■□□□□ 0.31
HOXC6P09630 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
HOXC6P09630 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17■□□□□ 0.31
HOXC6P09630 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17■□□□□ 0.31
HOXC6P09630 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HOXC6P09630 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HOXC6P09630 FAM90A7P-201ENST00000382628 1395 ntBASIC17■□□□□ 0.31
HOXC6P09630 FAM90A23P-201ENST00000400136 1395 ntBASIC17■□□□□ 0.31
HOXC6P09630 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17■□□□□ 0.31
HOXC6P09630 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17■□□□□ 0.31
HOXC6P09630 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC6P09630 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.99■□□□□ 0.31
HOXC6P09630 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 AL138725.1-201ENST00000407347 1314 ntBASIC16.99■□□□□ 0.31
HOXC6P09630 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms