Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.97□□□□□ -0.33
CD3DP04234 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.97□□□□□ -0.33
CD3DP04234 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.97□□□□□ -0.33
CD3DP04234 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.97□□□□□ -0.33
CD3DP04234 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.97□□□□□ -0.33
CD3DP04234 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.97□□□□□ -0.33
CD3DP04234 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.97□□□□□ -0.33
CD3DP04234 RNA5SP415-201ENST00000517246 115 ntBASIC12.97□□□□□ -0.33
CD3DP04234 AC018845.2-201ENST00000568326 409 ntBASIC12.97□□□□□ -0.33
CD3DP04234 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.97□□□□□ -0.33
CD3DP04234 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.97□□□□□ -0.33
CD3DP04234 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.97□□□□□ -0.33
CD3DP04234 MIR7706-201ENST00000613747 67 ntBASIC12.97□□□□□ -0.33
CD3DP04234 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
CD3DP04234 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.97□□□□□ -0.33
CD3DP04234 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.97□□□□□ -0.33
CD3DP04234 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.97□□□□□ -0.33
CD3DP04234 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 AC130686.1-201ENST00000622936 2466 ntBASIC12.97□□□□□ -0.33
CD3DP04234 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.97□□□□□ -0.33
CD3DP04234 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.97□□□□□ -0.33
CD3DP04234 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD3DP04234 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.97□□□□□ -0.33
CD3DP04234 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
CD3DP04234 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.96□□□□□ -0.33
CD3DP04234 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CD3DP04234 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CD3DP04234 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.96□□□□□ -0.33
CD3DP04234 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CD3DP04234 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.96□□□□□ -0.33
CD3DP04234 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.96□□□□□ -0.33
CD3DP04234 FAM210CP-201ENST00000445714 574 ntBASIC12.96□□□□□ -0.33
CD3DP04234 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.96□□□□□ -0.33
CD3DP04234 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.96□□□□□ -0.33
CD3DP04234 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.96□□□□□ -0.33
CD3DP04234 KRT18P35-201ENST00000510488 1269 ntBASIC12.96□□□□□ -0.33
CD3DP04234 AC112191.1-201ENST00000523689 701 ntBASIC12.96□□□□□ -0.33
CD3DP04234 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.96□□□□□ -0.33
CD3DP04234 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.96□□□□□ -0.33
CD3DP04234 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CD3DP04234 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CD3DP04234 PPT1-213ENST00000641319 2388 ntBASIC12.96□□□□□ -0.33
CD3DP04234 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CD3DP04234 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.96□□□□□ -0.33
CD3DP04234 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CD3DP04234 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD3DP04234 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CD3DP04234 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
CD3DP04234 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
CD3DP04234 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD3DP04234 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
CD3DP04234 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CD3DP04234 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
CD3DP04234 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CD3DP04234 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.96□□□□□ -0.34
CD3DP04234 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CD3DP04234 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.96□□□□□ -0.34
CD3DP04234 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD3DP04234 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CD3DP04234 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD3DP04234 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD3DP04234 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.95□□□□□ -0.34
CD3DP04234 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD3DP04234 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CD3DP04234 AKAP8P1-201ENST00000434743 1349 ntBASIC12.95□□□□□ -0.34
CD3DP04234 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD3DP04234 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms