Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.61■□□□□ 0.09
MT-ND3P03897 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.61■□□□□ 0.09
MT-ND3P03897 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
MT-ND3P03897 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.61■□□□□ 0.09
MT-ND3P03897 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-ND3P03897 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-ND3P03897 RN7SL204P-201ENST00000582831 262 ntBASIC15.61■□□□□ 0.09
MT-ND3P03897 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
MT-ND3P03897 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.61■□□□□ 0.09
MT-ND3P03897 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
MT-ND3P03897 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
MT-ND3P03897 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
MT-ND3P03897 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-ND3P03897 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.61■□□□□ 0.09
MT-ND3P03897 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.61■□□□□ 0.09
MT-ND3P03897 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-ND3P03897 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.61■□□□□ 0.09
MT-ND3P03897 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
MT-ND3P03897 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.61■□□□□ 0.09
MT-ND3P03897 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MT-ND3P03897 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.6■□□□□ 0.09
MT-ND3P03897 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.6■□□□□ 0.09
MT-ND3P03897 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
MT-ND3P03897 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
MT-ND3P03897 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
MT-ND3P03897 CICP4-201ENST00000447359 2812 ntBASIC15.6■□□□□ 0.09
MT-ND3P03897 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.6■□□□□ 0.09
MT-ND3P03897 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.6■□□□□ 0.09
MT-ND3P03897 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 AC092580.3-201ENST00000430932 139 ntBASIC15.6■□□□□ 0.09
MT-ND3P03897 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.6■□□□□ 0.09
MT-ND3P03897 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.6■□□□□ 0.09
MT-ND3P03897 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
MT-ND3P03897 AC027307.3-201ENST00000594262 1100 ntBASIC15.6■□□□□ 0.09
MT-ND3P03897 LINC02560-201ENST00000596379 459 ntBASIC15.6■□□□□ 0.09
MT-ND3P03897 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
MT-ND3P03897 AC009118.2-201ENST00000613275 655 ntBASIC15.6■□□□□ 0.09
MT-ND3P03897 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.6■□□□□ 0.09
MT-ND3P03897 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
MT-ND3P03897 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
MT-ND3P03897 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.6■□□□□ 0.09
MT-ND3P03897 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-ND3P03897 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.6■□□□□ 0.09
MT-ND3P03897 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
MT-ND3P03897 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND3P03897 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND3P03897 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
MT-ND3P03897 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND3P03897 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
MT-ND3P03897 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.59■□□□□ 0.09
MT-ND3P03897 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
MT-ND3P03897 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND3P03897 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND3P03897 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND3P03897 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND3P03897 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.59■□□□□ 0.09
MT-ND3P03897 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.59■□□□□ 0.09
MT-ND3P03897 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND3P03897 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
MT-ND3P03897 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND3P03897 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
MT-ND3P03897 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-ND3P03897 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
MT-ND3P03897 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms