Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.45□□□□□ -0.1
MT-ND1P03886 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.45□□□□□ -0.1
MT-ND1P03886 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.45□□□□□ -0.1
MT-ND1P03886 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MT-ND1P03886 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MT-ND1P03886 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 AL022342.1-201ENST00000400363 863 ntBASIC14.45□□□□□ -0.1
MT-ND1P03886 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
MT-ND1P03886 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
MT-ND1P03886 AC069335.1-201ENST00000489972 472 ntBASIC14.45□□□□□ -0.1
MT-ND1P03886 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.45□□□□□ -0.1
MT-ND1P03886 SLC25A39P2-201ENST00000537614 270 ntBASIC14.45□□□□□ -0.1
MT-ND1P03886 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
MT-ND1P03886 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.45□□□□□ -0.1
MT-ND1P03886 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.45□□□□□ -0.1
MT-ND1P03886 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
MT-ND1P03886 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
MT-ND1P03886 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.45□□□□□ -0.1
MT-ND1P03886 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
MT-ND1P03886 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.45□□□□□ -0.1
MT-ND1P03886 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.45□□□□□ -0.1
MT-ND1P03886 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
MT-ND1P03886 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MT-ND1P03886 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
MT-ND1P03886 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.45□□□□□ -0.1
MT-ND1P03886 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MT-ND1P03886 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
MT-ND1P03886 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
MT-ND1P03886 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MT-ND1P03886 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.44□□□□□ -0.1
MT-ND1P03886 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
MT-ND1P03886 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
MT-ND1P03886 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
MT-ND1P03886 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 GHSR-202ENST00000427970 912 ntBASIC14.44□□□□□ -0.1
MT-ND1P03886 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.44□□□□□ -0.1
MT-ND1P03886 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.44□□□□□ -0.1
MT-ND1P03886 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.44□□□□□ -0.1
MT-ND1P03886 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.44□□□□□ -0.1
MT-ND1P03886 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 AC055717.3-201ENST00000622967 595 ntBASIC14.44□□□□□ -0.1
MT-ND1P03886 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.44□□□□□ -0.1
MT-ND1P03886 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 AC152010.1-201ENST00000415779 2006 ntBASIC14.44□□□□□ -0.1
MT-ND1P03886 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
MT-ND1P03886 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MT-ND1P03886 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MT-ND1P03886 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MT-ND1P03886 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
MT-ND1P03886 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 BEND3P1-201ENST00000421591 1944 ntBASIC14.43□□□□□ -0.1
MT-ND1P03886 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms