Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.1■□□□□ 0.49
MBD4O95243 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MBD4O95243 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MBD4O95243 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.1■□□□□ 0.49
MBD4O95243 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.1■□□□□ 0.49
MBD4O95243 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MBD4O95243 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MBD4O95243 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.1■□□□□ 0.49
MBD4O95243 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MBD4O95243 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.1■□□□□ 0.49
MBD4O95243 RNA5SP412-201ENST00000516234 123 ntBASIC18.1■□□□□ 0.49
MBD4O95243 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.1■□□□□ 0.49
MBD4O95243 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MBD4O95243 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.1■□□□□ 0.49
MBD4O95243 AC023310.1-201ENST00000554836 735 ntBASIC18.1■□□□□ 0.49
MBD4O95243 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.1■□□□□ 0.49
MBD4O95243 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.1■□□□□ 0.49
MBD4O95243 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.1■□□□□ 0.49
MBD4O95243 AC138466.3-201ENST00000619983 221 ntBASIC18.1■□□□□ 0.49
MBD4O95243 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.1■□□□□ 0.49
MBD4O95243 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
MBD4O95243 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MBD4O95243 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.1■□□□□ 0.49
MBD4O95243 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MBD4O95243 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MBD4O95243 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.1■□□□□ 0.49
MBD4O95243 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.09■□□□□ 0.49
MBD4O95243 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD4O95243 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
MBD4O95243 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD4O95243 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
MBD4O95243 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD4O95243 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD4O95243 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.09■□□□□ 0.49
MBD4O95243 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
MBD4O95243 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD4O95243 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.09■□□□□ 0.49
MBD4O95243 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
MBD4O95243 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
MBD4O95243 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.09■□□□□ 0.49
MBD4O95243 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD4O95243 AL391280.1-201ENST00000506969 1062 ntBASIC18.09■□□□□ 0.49
MBD4O95243 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.09■□□□□ 0.49
MBD4O95243 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.09■□□□□ 0.49
MBD4O95243 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
MBD4O95243 OR10B1P-201ENST00000601666 907 ntBASIC18.09■□□□□ 0.49
MBD4O95243 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD4O95243 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
MBD4O95243 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
MBD4O95243 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD4O95243 AC144831.1-201ENST00000573312 2656 ntBASIC18.09■□□□□ 0.49
MBD4O95243 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD4O95243 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD4O95243 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.09■□□□□ 0.49
MBD4O95243 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.09■□□□□ 0.49
MBD4O95243 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD4O95243 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.09■□□□□ 0.49
MBD4O95243 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD4O95243 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.08■□□□□ 0.49
MBD4O95243 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.08■□□□□ 0.49
MBD4O95243 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MBD4O95243 AC023157.3-201ENST00000619086 2088 ntBASIC18.08■□□□□ 0.49
MBD4O95243 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
MBD4O95243 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
MBD4O95243 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
MBD4O95243 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
MBD4O95243 ACE3P-201ENST00000423435 1973 ntBASIC18.08■□□□□ 0.49
MBD4O95243 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MBD4O95243 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
MBD4O95243 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MBD4O95243 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MBD4O95243 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.08■□□□□ 0.48
MBD4O95243 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.08■□□□□ 0.48
MBD4O95243 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
MBD4O95243 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
MBD4O95243 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.08■□□□□ 0.48
MBD4O95243 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.08■□□□□ 0.48
MBD4O95243 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.08■□□□□ 0.48
MBD4O95243 FAM8A4P-201ENST00000435433 1213 ntBASIC18.08■□□□□ 0.48
MBD4O95243 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.08■□□□□ 0.48
MBD4O95243 DUX4L45-201ENST00000566406 1057 ntBASIC18.08■□□□□ 0.48
MBD4O95243 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.08■□□□□ 0.48
MBD4O95243 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.08■□□□□ 0.48
MBD4O95243 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.08■□□□□ 0.48
MBD4O95243 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.08■□□□□ 0.48
MBD4O95243 AC010328.2-201ENST00000597698 1111 ntBASIC18.08■□□□□ 0.48
MBD4O95243 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MBD4O95243 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
MBD4O95243 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
MBD4O95243 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MBD4O95243 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MBD4O95243 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MBD4O95243 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MBD4O95243 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
MBD4O95243 AC023090.2-201ENST00000625182 2110 ntBASIC18.08■□□□□ 0.48
MBD4O95243 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MBD4O95243 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
MBD4O95243 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MBD4O95243 FER1L4-210ENST00000615531 5998 ntBASIC18.08■□□□□ 0.48
MBD4O95243 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms