Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CCNKO75909 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CCNKO75909 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CCNKO75909 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.26□□□□□ -0.29
CCNKO75909 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.26□□□□□ -0.29
CCNKO75909 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.26□□□□□ -0.29
CCNKO75909 KRT8P22-201ENST00000562317 1415 ntBASIC13.26□□□□□ -0.29
CCNKO75909 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.26□□□□□ -0.29
CCNKO75909 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.26□□□□□ -0.29
CCNKO75909 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.26□□□□□ -0.29
CCNKO75909 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CCNKO75909 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.26□□□□□ -0.29
CCNKO75909 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.26□□□□□ -0.29
CCNKO75909 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCNKO75909 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCNKO75909 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CCNKO75909 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.25□□□□□ -0.29
CCNKO75909 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CCNKO75909 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.25□□□□□ -0.29
CCNKO75909 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCNKO75909 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.25□□□□□ -0.29
CCNKO75909 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
CCNKO75909 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CCNKO75909 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.25□□□□□ -0.29
CCNKO75909 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.25□□□□□ -0.29
CCNKO75909 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.25□□□□□ -0.29
CCNKO75909 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.25□□□□□ -0.29
CCNKO75909 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCNKO75909 TPT1P11-201ENST00000458482 498 ntBASIC13.25□□□□□ -0.29
CCNKO75909 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.25□□□□□ -0.29
CCNKO75909 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.25□□□□□ -0.29
CCNKO75909 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.25□□□□□ -0.29
CCNKO75909 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCNKO75909 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCNKO75909 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCNKO75909 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.25□□□□□ -0.29
CCNKO75909 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCNKO75909 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.24□□□□□ -0.29
CCNKO75909 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.24□□□□□ -0.29
CCNKO75909 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCNKO75909 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCNKO75909 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCNKO75909 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCNKO75909 SIGLEC16-201ENST00000599858 1437 ntBASIC13.24□□□□□ -0.29
CCNKO75909 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCNKO75909 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCNKO75909 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.24□□□□□ -0.29
CCNKO75909 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCNKO75909 AC233702.3-201ENST00000578656 1387 ntBASIC13.24□□□□□ -0.29
CCNKO75909 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CCNKO75909 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
CCNKO75909 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCNKO75909 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.24□□□□□ -0.29
CCNKO75909 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.24□□□□□ -0.29
CCNKO75909 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCNKO75909 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCNKO75909 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCNKO75909 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCNKO75909 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCNKO75909 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCNKO75909 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCNKO75909 PMS2P1-201ENST00000431037 1228 ntBASIC13.24□□□□□ -0.29
CCNKO75909 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.24□□□□□ -0.29
CCNKO75909 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCNKO75909 AC104076.2-201ENST00000448912 469 ntBASIC13.24□□□□□ -0.29
CCNKO75909 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms