Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL121723.1-201ENST00000445194 1519 ntBASIC14.29□□□□□ -0.12
TRIM3O75382 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRIM3O75382 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRIM3O75382 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 AC232323.1-201ENST00000540724 2099 ntBASIC14.29□□□□□ -0.12
TRIM3O75382 REXO1L5P-201ENST00000622260 2098 ntBASIC14.29□□□□□ -0.12
TRIM3O75382 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRIM3O75382 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRIM3O75382 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM3O75382 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM3O75382 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM3O75382 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRIM3O75382 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM3O75382 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRIM3O75382 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM3O75382 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRIM3O75382 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM3O75382 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TRIM3O75382 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
TRIM3O75382 AL133267.1-201ENST00000398220 340 ntBASIC14.28□□□□□ -0.12
TRIM3O75382 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM3O75382 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.28□□□□□ -0.12
TRIM3O75382 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIM3O75382 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM3O75382 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIM3O75382 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM3O75382 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM3O75382 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIM3O75382 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM3O75382 CICP23-201ENST00000605013 2741 ntBASIC14.28□□□□□ -0.12
TRIM3O75382 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM3O75382 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 AL390755.1-201ENST00000623716 2027 ntBASIC14.28□□□□□ -0.12
TRIM3O75382 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
TRIM3O75382 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRIM3O75382 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM3O75382 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM3O75382 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM3O75382 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM3O75382 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM3O75382 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM3O75382 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM3O75382 AC005252.3-201ENST00000623855 2258 ntBASIC14.27□□□□□ -0.12
TRIM3O75382 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM3O75382 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM3O75382 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
TRIM3O75382 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM3O75382 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM3O75382 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM3O75382 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.27□□□□□ -0.12
TRIM3O75382 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM3O75382 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM3O75382 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM3O75382 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM3O75382 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRIM3O75382 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM3O75382 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRIM3O75382 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM3O75382 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM3O75382 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms