Protein–RNA interactions for Protein: O60337

MARCH6, E3 ubiquitin-protein ligase MARCH6, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH6O60337 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.42■□□□□ 0.38
MARCH6O60337 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.42■□□□□ 0.38
MARCH6O60337 AC105233.6-201ENST00000642093 218 ntBASIC17.42■□□□□ 0.38
MARCH6O60337 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.42■□□□□ 0.38
MARCH6O60337 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MARCH6O60337 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
MARCH6O60337 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MARCH6O60337 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.41■□□□□ 0.38
MARCH6O60337 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.41■□□□□ 0.38
MARCH6O60337 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
MARCH6O60337 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.41■□□□□ 0.38
MARCH6O60337 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.41■□□□□ 0.38
MARCH6O60337 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MARCH6O60337 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC17.41■□□□□ 0.38
MARCH6O60337 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MARCH6O60337 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MARCH6O60337 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.41■□□□□ 0.38
MARCH6O60337 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
MARCH6O60337 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.41■□□□□ 0.38
MARCH6O60337 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
MARCH6O60337 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 GAPDHP40-201ENST00000505218 1006 ntBASIC17.41■□□□□ 0.38
MARCH6O60337 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.41■□□□□ 0.38
MARCH6O60337 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
MARCH6O60337 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.41■□□□□ 0.38
MARCH6O60337 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MARCH6O60337 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.41■□□□□ 0.38
MARCH6O60337 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
MARCH6O60337 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MARCH6O60337 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MARCH6O60337 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MARCH6O60337 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MARCH6O60337 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MARCH6O60337 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MARCH6O60337 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC17.4■□□□□ 0.38
MARCH6O60337 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MARCH6O60337 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MARCH6O60337 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.4■□□□□ 0.38
MARCH6O60337 KRT17P7-201ENST00000451704 1104 ntBASIC17.4■□□□□ 0.38
MARCH6O60337 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MARCH6O60337 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.4■□□□□ 0.38
MARCH6O60337 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.4■□□□□ 0.38
MARCH6O60337 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.4■□□□□ 0.38
MARCH6O60337 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.4■□□□□ 0.38
MARCH6O60337 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.4■□□□□ 0.38
MARCH6O60337 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.4■□□□□ 0.38
MARCH6O60337 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.4■□□□□ 0.38
MARCH6O60337 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MARCH6O60337 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.4■□□□□ 0.38
MARCH6O60337 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MARCH6O60337 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MARCH6O60337 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
MARCH6O60337 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MARCH6O60337 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.4■□□□□ 0.38
MARCH6O60337 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MARCH6O60337 AC007787.1-201ENST00000588095 1583 ntBASIC17.4■□□□□ 0.38
MARCH6O60337 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
MARCH6O60337 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MARCH6O60337 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.4■□□□□ 0.38
MARCH6O60337 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
MARCH6O60337 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MARCH6O60337 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MARCH6O60337 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
MARCH6O60337 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.39■□□□□ 0.38
MARCH6O60337 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.39■□□□□ 0.38
MARCH6O60337 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms