Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 AP006547.1-201ENST00000563435 692 ntBASIC15.14■□□□□ 0.01
PCDHGA12O60330 MIR4741-201ENST00000579822 90 ntBASIC15.14■□□□□ 0.01
PCDHGA12O60330 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGA12O60330 AC069224.1-201ENST00000566372 1715 ntBASIC15.14■□□□□ 0.01
PCDHGA12O60330 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA12O60330 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 ACTBP8-201ENST00000403258 1108 ntBASIC15.13■□□□□ 0.01
PCDHGA12O60330 MIR1202-201ENST00000408529 83 ntBASIC15.13■□□□□ 0.01
PCDHGA12O60330 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 SCARNA20.5-201ENST00000516991 142 ntBASIC15.13■□□□□ 0.01
PCDHGA12O60330 RNA5SP423-201ENST00000517127 109 ntBASIC15.13■□□□□ 0.01
PCDHGA12O60330 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.13■□□□□ 0.01
PCDHGA12O60330 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 AC023157.3-201ENST00000619086 2088 ntBASIC15.13■□□□□ 0.01
PCDHGA12O60330 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGA12O60330 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA12O60330 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 AC114812.1-204ENST00000449669 728 ntBASIC15.12■□□□□ 0.01
PCDHGA12O60330 IGHJ2P-201ENST00000454480 60 ntBASIC15.12■□□□□ 0.01
PCDHGA12O60330 RPSAP36-202ENST00000494591 1261 ntBASIC15.12■□□□□ 0.01
PCDHGA12O60330 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms