Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 CICP11-201ENST00000434745 2827 ntBASIC14.58□□□□□ -0.08
CLOCKO15516 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CLOCKO15516 AC097359.2-201ENST00000604992 2389 ntBASIC14.58□□□□□ -0.08
CLOCKO15516 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CLOCKO15516 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CLOCKO15516 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CLOCKO15516 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.58□□□□□ -0.08
CLOCKO15516 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.58□□□□□ -0.08
CLOCKO15516 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 AC023141.5-201ENST00000458585 616 ntBASIC14.58□□□□□ -0.08
CLOCKO15516 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.58□□□□□ -0.08
CLOCKO15516 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.58□□□□□ -0.08
CLOCKO15516 RARRES2P8-201ENST00000566335 367 ntBASIC14.58□□□□□ -0.08
CLOCKO15516 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.58□□□□□ -0.08
CLOCKO15516 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.58□□□□□ -0.08
CLOCKO15516 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CLOCKO15516 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.58□□□□□ -0.08
CLOCKO15516 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLOCKO15516 AL136982.4-201ENST00000437689 1740 ntBASIC14.58□□□□□ -0.08
CLOCKO15516 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CLOCKO15516 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
CLOCKO15516 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.57□□□□□ -0.08
CLOCKO15516 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLOCKO15516 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.57□□□□□ -0.08
CLOCKO15516 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CLOCKO15516 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
CLOCKO15516 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.57□□□□□ -0.08
CLOCKO15516 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.57□□□□□ -0.08
CLOCKO15516 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.57□□□□□ -0.08
CLOCKO15516 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.57□□□□□ -0.08
CLOCKO15516 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLOCKO15516 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.57□□□□□ -0.08
CLOCKO15516 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 RN7SL589P-201ENST00000481268 310 ntBASIC14.57□□□□□ -0.08
CLOCKO15516 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CLOCKO15516 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.57□□□□□ -0.08
CLOCKO15516 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.57□□□□□ -0.08
CLOCKO15516 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CLOCKO15516 AC097359.3-201ENST00000603982 1210 ntBASIC14.57□□□□□ -0.08
CLOCKO15516 SPTSSB-204ENST00000617024 1292 ntBASIC14.57□□□□□ -0.08
CLOCKO15516 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.57□□□□□ -0.08
CLOCKO15516 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLOCKO15516 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.57□□□□□ -0.08
CLOCKO15516 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CLOCKO15516 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.57□□□□□ -0.08
CLOCKO15516 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CLOCKO15516 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CLOCKO15516 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLOCKO15516 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CLOCKO15516 CR383656.2-201ENST00000548656 2254 ntBASIC14.57□□□□□ -0.08
CLOCKO15516 AC113367.3-201ENST00000508316 1912 ntBASIC14.56□□□□□ -0.08
CLOCKO15516 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.56□□□□□ -0.08
CLOCKO15516 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
CLOCKO15516 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLOCKO15516 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.56□□□□□ -0.08
CLOCKO15516 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLOCKO15516 AL139400.1-201ENST00000366220 510 ntBASIC14.56□□□□□ -0.08
CLOCKO15516 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.56□□□□□ -0.08
CLOCKO15516 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.56□□□□□ -0.08
CLOCKO15516 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms