Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SRRM4A7MD48 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRRM4A7MD48 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 BASP1P1-201ENST00000430708 665 ntBASIC12.29□□□□□ -0.44
SRRM4A7MD48 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 RN7SL399P-201ENST00000471648 279 ntBASIC12.29□□□□□ -0.44
SRRM4A7MD48 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 AC093214.1-201ENST00000511688 1107 ntBASIC12.29□□□□□ -0.44
SRRM4A7MD48 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRRM4A7MD48 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.29□□□□□ -0.44
SRRM4A7MD48 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms