Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV18A0A075B6X5 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 REXO1L4P-201ENST00000605109 1937 ntBASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV18A0A075B6X5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 AP000842.3-202ENST00000569238 1080 ntBASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV18A0A075B6X5 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms