Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RCL1Q9Y2P8 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 RPS2P28-201ENST00000314255 741 ntBASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 AZGP1P1-201ENST00000411909 902 ntBASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 HCG4P8-203ENST00000443049 980 ntBASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 IFNL4P1-201ENST00000607083 540 ntBASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RCL1Q9Y2P8 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms