Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRCH1Q9Y2L9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRCH1Q9Y2L9 KRT8P22-201ENST00000562317 1415 ntBASIC14.58□□□□□ -0.07
LRCH1Q9Y2L9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRCH1Q9Y2L9 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LRCH1Q9Y2L9 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 OR7E14P-202ENST00000530490 1290 ntBASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 NKAPP1-205ENST00000585790 367 ntBASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 MTDHP4-201ENST00000600287 670 ntBASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 AF228730.7-201ENST00000641842 219 ntBASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRCH1Q9Y2L9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 AC107918.2-201ENST00000530817 355 ntBASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 BX640515.1-201ENST00000617215 977 ntBASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms