Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 PPT1-215ENST00000641471 2368 ntBASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPH3AQ9Y2J0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 C1QBPP1-201ENST00000400117 770 ntBASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 AL442647.2-201ENST00000429864 857 ntBASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 AC025181.2-201ENST00000606994 802 ntBASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPH3AQ9Y2J0 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms