Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 AC136604.1-201ENST00000418535 575 ntBASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 GNRHR2-203ENST00000581100 1187 ntBASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 RN7SL190P-201ENST00000582519 257 ntBASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.65■□□□□ 0.74
PDZRN3Q9UPQ7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.64■□□□□ 0.74
PDZRN3Q9UPQ7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
PDZRN3Q9UPQ7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDZRN3Q9UPQ7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
PDZRN3Q9UPQ7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 AC006001.1-201ENST00000325130 474 ntBASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN3Q9UPQ7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 AL136379.1-201ENST00000623471 2642 ntBASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 AC026410.3-201ENST00000514280 936 ntBASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 AC025279.2-201ENST00000569730 653 ntBASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 AC244452.3-201ENST00000636814 210 ntBASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.63■□□□□ 0.73
PDZRN3Q9UPQ7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms