Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
COPS3Q9UNS2 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 AL133267.1-201ENST00000398220 340 ntBASIC13.66□□□□□ -0.22
COPS3Q9UNS2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 AL589739.1-201ENST00000607720 493 ntBASIC13.66□□□□□ -0.22
COPS3Q9UNS2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.66□□□□□ -0.22
COPS3Q9UNS2 AC009093.7-201ENST00000623853 1223 ntBASIC13.66□□□□□ -0.22
COPS3Q9UNS2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 AC012508.2-201ENST00000567613 1472 ntBASIC13.66□□□□□ -0.22
COPS3Q9UNS2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.66□□□□□ -0.22
COPS3Q9UNS2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COPS3Q9UNS2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms