Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 AC068587.8-201ENST00000641239 219 ntBASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 AC105917.1-201ENST00000506637 2539 ntBASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 AC004899.1-201ENST00000424687 1714 ntBASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 FNTAP2-201ENST00000430308 634 ntBASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 AC022217.1-201ENST00000521069 738 ntBASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 MIR3619-201ENST00000579667 83 ntBASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 AC138035.3-201ENST00000622706 2791 ntBASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SYNPO2Q9UMS6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 EIF4HP1-201ENST00000453115 687 ntBASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 AC009884.2-201ENST00000603110 324 ntBASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 AL645939.5-201ENST00000606834 243 ntBASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 AC027601.3-201ENST00000622907 509 ntBASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 LINC01101-201ENST00000622953 1884 ntBASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 AC007292.2-201ENST00000593524 1812 ntBASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms