Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.21■□□□□ 0.67
CHPF2Q9P2E5 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHPF2Q9P2E5 AC244157.2-201ENST00000616239 1006 ntBASIC19.21■□□□□ 0.67
CHPF2Q9P2E5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC19.21■□□□□ 0.67
CHPF2Q9P2E5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.21■□□□□ 0.67
CHPF2Q9P2E5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CHPF2Q9P2E5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.21■□□□□ 0.67
CHPF2Q9P2E5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CHPF2Q9P2E5 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.21■□□□□ 0.67
CHPF2Q9P2E5 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 AL022328.3-201ENST00000607943 679 ntBASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 AL358472.3-201ENST00000608147 415 ntBASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHPF2Q9P2E5 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 AC005730.2-201ENST00000564549 1184 ntBASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 AL138725.1-201ENST00000407347 1314 ntBASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 AC011270.2-201ENST00000624293 2550 ntBASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHPF2Q9P2E5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CHPF2Q9P2E5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms