Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDH20Q9HBT6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 AL162726.2-201ENST00000438986 1017 ntBASIC13.38□□□□□ -0.27
CDH20Q9HBT6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 RN7SL692P-201ENST00000464677 288 ntBASIC13.38□□□□□ -0.27
CDH20Q9HBT6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 AC011495.1-201ENST00000498085 584 ntBASIC13.38□□□□□ -0.27
CDH20Q9HBT6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 AL359711.2-201ENST00000563105 872 ntBASIC13.38□□□□□ -0.27
CDH20Q9HBT6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 AC025048.6-201ENST00000634326 1161 ntBASIC13.38□□□□□ -0.27
CDH20Q9HBT6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 PPT1-215ENST00000641471 2368 ntBASIC13.38□□□□□ -0.27
CDH20Q9HBT6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 AC126365.1-201ENST00000578585 1514 ntBASIC13.38□□□□□ -0.27
CDH20Q9HBT6 KRT8P22-201ENST00000562317 1415 ntBASIC13.38□□□□□ -0.27
CDH20Q9HBT6 AC112693.3-201ENST00000624819 1983 ntBASIC13.38□□□□□ -0.27
CDH20Q9HBT6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDH20Q9HBT6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.37□□□□□ -0.27
CDH20Q9HBT6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDH20Q9HBT6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms