Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 AC004898.1-201ENST00000451057 766 ntBASIC17.71■□□□□ 0.43
SH2D4AQ9H788 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D4AQ9H788 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
SH2D4AQ9H788 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
SH2D4AQ9H788 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SH2D4AQ9H788 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SH2D4AQ9H788 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 AC012508.2-201ENST00000567613 1472 ntBASIC17.7■□□□□ 0.42
SH2D4AQ9H788 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 POM121L10P-201ENST00000436994 1285 ntBASIC17.7■□□□□ 0.42
SH2D4AQ9H788 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.7■□□□□ 0.42
SH2D4AQ9H788 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 AL096828.3-201ENST00000615354 462 ntBASIC17.7■□□□□ 0.42
SH2D4AQ9H788 AC138466.3-201ENST00000619983 221 ntBASIC17.7■□□□□ 0.42
SH2D4AQ9H788 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 AC144831.1-201ENST00000573312 2656 ntBASIC17.7■□□□□ 0.42
SH2D4AQ9H788 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D4AQ9H788 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 AC090616.6-203ENST00000579186 1945 ntBASIC17.69■□□□□ 0.42
SH2D4AQ9H788 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 REXO1L5P-201ENST00000622260 2098 ntBASIC17.69■□□□□ 0.42
SH2D4AQ9H788 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms