Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 SRD5A3P1-201ENST00000603021 949 ntBASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 AL008721.1-201ENST00000609964 604 ntBASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF3BQ9BZI7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 AC022144.1-201ENST00000602255 1580 ntBASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 BTBD7P1-201ENST00000447253 1453 ntBASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 HLA-V-201ENST00000429037 534 ntBASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 MEIS3P1-201ENST00000495167 958 ntBASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 AC104794.3-201ENST00000566840 1248 ntBASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 SAMD11P1-201ENST00000571429 661 ntBASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 AL359881.2-201ENST00000602973 570 ntBASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 AC005089.1-201ENST00000619486 2241 ntBASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
UPF3BQ9BZI7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPF3BQ9BZI7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms