Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 AC126177.1-201ENST00000547829 2218 ntBASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 AC253536.4-201ENST00000440539 267 ntBASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 SERPINA13P-202ENST00000478994 924 ntBASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 AL391280.1-201ENST00000506969 1062 ntBASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 AC106820.3-201ENST00000561653 397 ntBASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 AC138649.2-201ENST00000615886 705 ntBASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYNGAP1Q96PV0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 AC138627.1-207ENST00000641560 1006 ntBASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.24■□□□□ 0.35
SYNGAP1Q96PV0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 AC104457.1-201ENST00000401024 814 ntBASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 RPL5P21-201ENST00000404620 815 ntBASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 FXNP2-201ENST00000411625 547 ntBASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 AC016700.1-201ENST00000429424 312 ntBASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 CHMP1AP1-201ENST00000445563 662 ntBASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 AC105129.2-201ENST00000559536 390 ntBASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 AC015967.2-201ENST00000624092 234 ntBASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 AC006435.4-201ENST00000625037 234 ntBASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 AL356737.1-201ENST00000634391 234 ntBASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SYNGAP1Q96PV0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms