Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALPK3Q96L96 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ALPK3Q96L96 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALPK3Q96L96 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
ALPK3Q96L96 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 AC092862.1-201ENST00000541534 533 ntBASIC16.1■□□□□ 0.17
ALPK3Q96L96 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 MIR6746-201ENST00000620971 63 ntBASIC16.1■□□□□ 0.17
ALPK3Q96L96 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ALPK3Q96L96 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALPK3Q96L96 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 RN7SL357P-201ENST00000581065 298 ntBASIC16.09■□□□□ 0.17
ALPK3Q96L96 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ALPK3Q96L96 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ALPK3Q96L96 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ALPK3Q96L96 AL109809.1-201ENST00000418979 1367 ntBASIC16.09■□□□□ 0.17
ALPK3Q96L96 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ALPK3Q96L96 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ALPK3Q96L96 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ALPK3Q96L96 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ALPK3Q96L96 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ALPK3Q96L96 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ALPK3Q96L96 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ALPK3Q96L96 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
ALPK3Q96L96 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 AC093826.1-201ENST00000508655 993 ntBASIC16.09■□□□□ 0.17
ALPK3Q96L96 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 PMEL-214ENST00000550447 901 ntTSL 3 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ALPK3Q96L96 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 AL590440.2-201ENST00000641973 1595 ntBASIC16.09■□□□□ 0.17
ALPK3Q96L96 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ALPK3Q96L96 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.09■□□□□ 0.17
ALPK3Q96L96 AC007292.2-201ENST00000593524 1812 ntBASIC16.08■□□□□ 0.17
ALPK3Q96L96 AC013726.1-201ENST00000563747 2285 ntBASIC16.08■□□□□ 0.17
ALPK3Q96L96 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ALPK3Q96L96 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
ALPK3Q96L96 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ALPK3Q96L96 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.08■□□□□ 0.17
ALPK3Q96L96 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
ALPK3Q96L96 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ALPK3Q96L96 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms