Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
USP9XQ93008 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
USP9XQ93008 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.03□□□□□ -0.32
USP9XQ93008 AC087392.5-201ENST00000612517 489 ntBASIC13.03□□□□□ -0.32
USP9XQ93008 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC13.03□□□□□ -0.32
USP9XQ93008 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
USP9XQ93008 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.03□□□□□ -0.32
USP9XQ93008 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.03□□□□□ -0.32
USP9XQ93008 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
USP9XQ93008 AC013726.1-201ENST00000563747 2285 ntBASIC13.03□□□□□ -0.32
USP9XQ93008 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.03□□□□□ -0.32
USP9XQ93008 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.03□□□□□ -0.32
USP9XQ93008 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
USP9XQ93008 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
USP9XQ93008 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
USP9XQ93008 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
USP9XQ93008 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
USP9XQ93008 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
USP9XQ93008 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
USP9XQ93008 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.02□□□□□ -0.32
USP9XQ93008 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.02□□□□□ -0.32
USP9XQ93008 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
USP9XQ93008 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.02□□□□□ -0.32
USP9XQ93008 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
USP9XQ93008 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
USP9XQ93008 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
USP9XQ93008 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.02□□□□□ -0.32
USP9XQ93008 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
USP9XQ93008 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.02□□□□□ -0.32
USP9XQ93008 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.02□□□□□ -0.32
USP9XQ93008 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.02□□□□□ -0.32
USP9XQ93008 AC092299.1-201ENST00000632679 757 ntBASIC13.02□□□□□ -0.32
USP9XQ93008 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
USP9XQ93008 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
USP9XQ93008 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.02□□□□□ -0.32
USP9XQ93008 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
USP9XQ93008 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
USP9XQ93008 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
USP9XQ93008 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USP9XQ93008 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
USP9XQ93008 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USP9XQ93008 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
USP9XQ93008 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
USP9XQ93008 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USP9XQ93008 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USP9XQ93008 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USP9XQ93008 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
USP9XQ93008 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
USP9XQ93008 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
USP9XQ93008 AL645933.1-201ENST00000440087 609 ntBASIC13.02□□□□□ -0.33
USP9XQ93008 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.02□□□□□ -0.33
USP9XQ93008 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
USP9XQ93008 MIR3188-201ENST00000583494 85 ntBASIC13.02□□□□□ -0.33
USP9XQ93008 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
USP9XQ93008 AL512324.3-201ENST00000619383 882 ntBASIC13.02□□□□□ -0.33
USP9XQ93008 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
USP9XQ93008 AL138725.1-201ENST00000407347 1314 ntBASIC13.02□□□□□ -0.33
USP9XQ93008 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USP9XQ93008 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.02□□□□□ -0.33
USP9XQ93008 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USP9XQ93008 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.02□□□□□ -0.33
USP9XQ93008 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
USP9XQ93008 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
USP9XQ93008 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
USP9XQ93008 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC13.02□□□□□ -0.33
USP9XQ93008 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
USP9XQ93008 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.01□□□□□ -0.33
USP9XQ93008 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
USP9XQ93008 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
USP9XQ93008 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.01□□□□□ -0.33
USP9XQ93008 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.01□□□□□ -0.33
USP9XQ93008 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.01□□□□□ -0.33
USP9XQ93008 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.01□□□□□ -0.33
USP9XQ93008 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.01□□□□□ -0.33
USP9XQ93008 AC106047.2-201ENST00000511723 743 ntBASIC13.01□□□□□ -0.33
USP9XQ93008 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC13.01□□□□□ -0.33
USP9XQ93008 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.01□□□□□ -0.33
USP9XQ93008 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
USP9XQ93008 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC13.01□□□□□ -0.33
USP9XQ93008 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.01□□□□□ -0.33
USP9XQ93008 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.01□□□□□ -0.33
USP9XQ93008 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
USP9XQ93008 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USP9XQ93008 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms