Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.85■□□□□ 0.45
SMARCC2Q8TAQ2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SMARCC2Q8TAQ2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SMARCC2Q8TAQ2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMARCC2Q8TAQ2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SMARCC2Q8TAQ2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMARCC2Q8TAQ2 AC007191.1-201ENST00000623179 2995 ntBASIC17.85■□□□□ 0.45
SMARCC2Q8TAQ2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.85■□□□□ 0.45
SMARCC2Q8TAQ2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SMARCC2Q8TAQ2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.85■□□□□ 0.45
SMARCC2Q8TAQ2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.85■□□□□ 0.45
SMARCC2Q8TAQ2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMARCC2Q8TAQ2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 KRT8P22-201ENST00000562317 1415 ntBASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 AC004066.1-201ENST00000502488 802 ntBASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 CU634019.7-201ENST00000624153 1185 ntBASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 FP236241.2-201ENST00000624906 1185 ntBASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 AC140479.7-201ENST00000636301 2332 ntBASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
SMARCC2Q8TAQ2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMARCC2Q8TAQ2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.83■□□□□ 0.45
SMARCC2Q8TAQ2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SMARCC2Q8TAQ2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.83■□□□□ 0.45
SMARCC2Q8TAQ2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMARCC2Q8TAQ2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMARCC2Q8TAQ2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SMARCC2Q8TAQ2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMARCC2Q8TAQ2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMARCC2Q8TAQ2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 AL157414.3-201ENST00000624276 1954 ntBASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 C1QBPP1-201ENST00000400117 770 ntBASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 SOCS2P1-201ENST00000417727 557 ntBASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 AL162726.2-201ENST00000438986 1017 ntBASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMARCC2Q8TAQ2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SMARCC2Q8TAQ2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms