Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC105137.3-201ENST00000617588 984 ntBASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 ZBED1P1-201ENST00000502364 1930 ntBASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 AC013268.4-201ENST00000637413 2228 ntBASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
CFAP43Q8NDM7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.31
CFAP43Q8NDM7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.31
CFAP43Q8NDM7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC23.2■■□□□ 1.31
CFAP43Q8NDM7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
CFAP43Q8NDM7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 AC008805.1-201ENST00000590892 364 ntBASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 CASP16P-204ENST00000635032 809 ntBASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP43Q8NDM7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 KLF2P1-201ENST00000447438 1042 ntBASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 POU5F1P2-201ENST00000521750 823 ntBASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 AL157407.1-201ENST00000435784 904 ntBASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CFAP43Q8NDM7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 RPL8P2-201ENST00000430538 502 ntBASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 BUD31-205ENST00000456893 512 ntTSL 5 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 AC025262.2-201ENST00000623975 1056 ntBASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 CMC2-224ENST00000630396 481 ntTSL 5 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CFAP43Q8NDM7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms