Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATPAF2Q8N5M1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
ATPAF2Q8N5M1 AC103702.1-201ENST00000548801 2630 ntBASIC15.64■□□□□ 0.1
ATPAF2Q8N5M1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.64■□□□□ 0.1
ATPAF2Q8N5M1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 AP006294.1-201ENST00000415407 339 ntBASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 AC005252.2-201ENST00000624630 1141 ntBASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 OR2I1P-210ENST00000642037 4691 ntBASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATPAF2Q8N5M1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 LILRP1-201ENST00000444199 1370 ntBASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 REXO1L5P-201ENST00000622260 2098 ntBASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 RNU1-114P-201ENST00000365297 166 ntBASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF2Q8N5M1 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms