Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 HCG27-204ENST00000424675 895 ntTSL 3 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 DUX4L50-201ENST00000455245 715 ntBASIC20.47■□□□□ 0.87
XRN1Q8IZH2 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 AL139384.1-201ENST00000612143 3047 ntBASIC20.47■□□□□ 0.87
XRN1Q8IZH2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 AC009093.10-201ENST00000641956 1442 ntBASIC20.47■□□□□ 0.87
XRN1Q8IZH2 SERF2-206ENST00000409291 807 ntTSL 3 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 AC073869.2-201ENST00000417338 1026 ntBASIC20.47■□□□□ 0.87
XRN1Q8IZH2 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 ELP5-212ENST00000574255 671 ntTSL 2 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
XRN1Q8IZH2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 AP005117.1-202ENST00000581724 1908 ntBASIC20.46■□□□□ 0.87
XRN1Q8IZH2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 GCSHP3-201ENST00000431120 391 ntBASIC20.46■□□□□ 0.87
XRN1Q8IZH2 AC024293.1-201ENST00000467930 498 ntBASIC20.46■□□□□ 0.87
XRN1Q8IZH2 AC084752.1-201ENST00000509766 622 ntBASIC20.46■□□□□ 0.87
XRN1Q8IZH2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 AC112693.3-201ENST00000624819 1983 ntBASIC20.46■□□□□ 0.87
XRN1Q8IZH2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRN1Q8IZH2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC20.45■□□□□ 0.87
XRN1Q8IZH2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 CELP-201ENST00000411440 1249 ntTSL 5 BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 KHSRPP1-201ENST00000427983 1768 ntBASIC20.45■□□□□ 0.86
XRN1Q8IZH2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
XRN1Q8IZH2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
XRN1Q8IZH2 BAK1P1-201ENST00000317045 636 ntBASIC20.44■□□□□ 0.86
XRN1Q8IZH2 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
XRN1Q8IZH2 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
XRN1Q8IZH2 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC20.44■□□□□ 0.86
XRN1Q8IZH2 FAU-202ENST00000434372 533 ntTSL 2 BASIC20.44■□□□□ 0.86
XRN1Q8IZH2 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC20.44■□□□□ 0.86
XRN1Q8IZH2 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC20.44■□□□□ 0.86
XRN1Q8IZH2 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
XRN1Q8IZH2 AP000322.3-201ENST00000608665 388 ntBASIC20.44■□□□□ 0.86
XRN1Q8IZH2 AL513523.2-202ENST00000427283 2040 ntBASIC20.44■□□□□ 0.86
XRN1Q8IZH2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
XRN1Q8IZH2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
XRN1Q8IZH2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms