Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 AC097376.2-205ENST00000610159 5334 ntBASIC16.42■□□□□ 0.22
CCDC170Q8IYT3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 AC000095.1-201ENST00000603208 874 ntBASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 AC004835.2-201ENST00000603762 682 ntBASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 AC074044.1-201ENST00000609673 707 ntBASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 MIR6080-201ENST00000617359 66 ntBASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 AP001059.3-201ENST00000619053 235 ntBASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC170Q8IYT3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 MIR574-201ENST00000385209 96 ntBASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC170Q8IYT3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms