Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 RPSAP43-201ENST00000402237 625 ntBASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 PDPK2P-202ENST00000562415 1191 ntBASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 AC139530.3-201ENST00000620344 690 ntBASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 AC138969.3-201ENST00000546612 1459 ntBASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 AC138932.2-201ENST00000548268 1459 ntBASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 AC126755.4-201ENST00000549796 1459 ntBASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 FAM86C2P-203ENST00000528684 1004 ntBASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 AL135744.1-201ENST00000565098 629 ntBASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 AC018529.2-202ENST00000611482 3087 ntBASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 AL645728.2-202ENST00000641679 227 ntBASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 HAL-202ENST00000538703 2637 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM42Q8IWZ5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 TFAMP1-201ENST00000412727 736 ntBASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms