Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 USB1-205ENST00000561743 1135 ntTSL 3 BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 HMGB1P24-201ENST00000611897 328 ntBASIC20.93■□□□□ 0.94
UBR1Q8IWV7 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 AP002353.1-201ENST00000528257 1599 ntBASIC20.93■□□□□ 0.94
UBR1Q8IWV7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.93■□□□□ 0.94
UBR1Q8IWV7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBR1Q8IWV7 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 AC093826.1-201ENST00000508655 993 ntBASIC20.92■□□□□ 0.94
UBR1Q8IWV7 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 AC124068.2-201ENST00000569473 1109 ntBASIC20.92■□□□□ 0.94
UBR1Q8IWV7 PEBP1P2-201ENST00000603980 558 ntBASIC20.92■□□□□ 0.94
UBR1Q8IWV7 AL118522.1-201ENST00000611368 560 ntBASIC20.92■□□□□ 0.94
UBR1Q8IWV7 MRPL37P1-201ENST00000592451 1337 ntBASIC20.92■□□□□ 0.94
UBR1Q8IWV7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 AC009093.10-201ENST00000641956 1442 ntBASIC20.92■□□□□ 0.94
UBR1Q8IWV7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 KHSRPP1-201ENST00000427983 1768 ntBASIC20.92■□□□□ 0.94
UBR1Q8IWV7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 KRT18P46-201ENST00000435568 1279 ntBASIC20.92■□□□□ 0.94
UBR1Q8IWV7 FAM86KP-201ENST00000509817 987 ntBASIC20.92■□□□□ 0.94
UBR1Q8IWV7 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC20.92■□□□□ 0.94
UBR1Q8IWV7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBR1Q8IWV7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBR1Q8IWV7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBR1Q8IWV7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.91■□□□□ 0.94
UBR1Q8IWV7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC20.91■□□□□ 0.94
UBR1Q8IWV7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.91■□□□□ 0.94
UBR1Q8IWV7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBR1Q8IWV7 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBR1Q8IWV7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
UBR1Q8IWV7 RPL18AP8-201ENST00000486071 528 ntBASIC20.91■□□□□ 0.94
UBR1Q8IWV7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.91■□□□□ 0.94
UBR1Q8IWV7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.91■□□□□ 0.94
UBR1Q8IWV7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBR1Q8IWV7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.91■□□□□ 0.94
UBR1Q8IWV7 F10-203ENST00000409306 1450 ntTSL 3 BASIC20.91■□□□□ 0.94
UBR1Q8IWV7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC20.9■□□□□ 0.94
UBR1Q8IWV7 SURF4-203ENST00000371991 715 ntTSL 3 BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 RN7SL530P-201ENST00000485097 298 ntBASIC20.9■□□□□ 0.94
UBR1Q8IWV7 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 FZD10-202ENST00000539839 3282 ntBASIC20.9■□□□□ 0.94
UBR1Q8IWV7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms