Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 AC009090.5-201ENST00000624886 2285 ntBASIC18.75■□□□□ 0.59
COL23A1Q86Y22 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 MT3-203ENST00000565838 421 ntTSL 3 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 AC112504.1-201ENST00000623415 1841 ntBASIC18.74■□□□□ 0.59
COL23A1Q86Y22 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 HLA-DMA-203ENST00000395305 777 ntBASIC18.74■□□□□ 0.59
COL23A1Q86Y22 ALG3P1-201ENST00000508806 1114 ntBASIC18.74■□□□□ 0.59
COL23A1Q86Y22 AC114947.1-202ENST00000514136 344 ntBASIC18.74■□□□□ 0.59
COL23A1Q86Y22 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 AC018629.1-201ENST00000623381 1736 ntBASIC18.74■□□□□ 0.59
COL23A1Q86Y22 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL23A1Q86Y22 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 MTHFR-217ENST00000641820 1569 ntBASIC18.73■□□□□ 0.59
COL23A1Q86Y22 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 AC003102.2-201ENST00000589195 1469 ntBASIC18.73■□□□□ 0.59
COL23A1Q86Y22 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 RNA5SP359-201ENST00000364838 113 ntBASIC18.73■□□□□ 0.59
COL23A1Q86Y22 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 AREG-202ENST00000502307 956 ntTSL 5 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 DBP-202ENST00000593500 712 ntTSL 2 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.73■□□□□ 0.59
COL23A1Q86Y22 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL23A1Q86Y22 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.72■□□□□ 0.59
COL23A1Q86Y22 CICP11-201ENST00000434745 2827 ntBASIC18.72■□□□□ 0.59
COL23A1Q86Y22 AL662844.4-201ENST00000606367 2838 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms