Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 DUX4L27-201ENST00000554796 1261 ntBASIC13.66□□□□□ -0.22
LRRC28Q86X40 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 AC007967.4-201ENST00000614700 386 ntBASIC13.66□□□□□ -0.22
LRRC28Q86X40 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 AC113367.3-201ENST00000508316 1912 ntBASIC13.65□□□□□ -0.22
LRRC28Q86X40 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 AL353705.2-201ENST00000428243 662 ntBASIC13.65□□□□□ -0.22
LRRC28Q86X40 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
LRRC28Q86X40 AL035456.1-201ENST00000456064 1369 ntBASIC13.65□□□□□ -0.22
LRRC28Q86X40 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRC28Q86X40 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
LRRC28Q86X40 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 REXO1L2P-201ENST00000425429 2069 ntBASIC13.64□□□□□ -0.23
LRRC28Q86X40 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.64□□□□□ -0.23
LRRC28Q86X40 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms